DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and usp31

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_002932037.2 Gene:usp31 / 100492761 XenbaseID:XB-GENE-920956 Length:1248 Species:Xenopus tropicalis


Alignment Length:987 Identity:206/987 - (20%)
Similarity:310/987 - (31%) Gaps:345/987 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 TPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAI-----PMPPPEPSSGLSTSDSLTSVP 267
            :|..|..||. :..:|.|.......||.|........|:     .....|||...:.|.:....|
 Frog     7 SPAAPAAGGK-EKKASLGKKLFWRRGGLVSRFLRTLSALSHLNSEHDHAEPSRDKAGSPARAEPP 70

  Fly   268 GMAKRIDQYSATTNGNTGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPFLLS 332
            . |..:.|.....|           |..|..:.|:|.:.||.|.|||||.|||:|||:.|.....
 Frog    71 S-ALLLQQQQQQQN-----------ERSRPPSPRVPGLSGLKNHGNTCFMNAVLQCLSNTDLFAE 123

  Fly   333 VL-----KELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGGLTAALANALEELQAGGSVF 392
            .|     ||  .|......||||   .|:|::...:.|...|.|         .||        :
 Frog   124 FLGLEQYKE--APESPLASPGGT---HDRGEVTEQLAKLLRSLW---------TLE--------Y 166

  Fly   393 TPR--KLFDRLCVK-CPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVS 454
            ||:  :.|..:..: ..|:.|..||||.|.|..||:.| :|||         |:..|.:....:.
 Frog   167 TPQHSREFKAIVSRNALQYRGTSQHDAQEFLLWLLDRV-HEDL---------NVVVKHKPRPPLE 221

  Fly   455 EEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQP--- 516
            |::..:...:.: :|..:   :::|:....|:|||..|...|:..:.||.:|||:.:...:|   
 Frog   222 EDLTGEGPTFPS-SGTFV---QELFQAQYRSSLTCPHCQKQSNTFDPFLCISLPIPLPHTRPLYV 282

  Fly   517 --------PQRRKPSPELSLTSSSSSVTPSTGQPT--------INTKFTDGSVNFTASSPSFF-- 563
                    ....:....:.|:.:...:..:..|.|        |...:.||      ...|||  
 Frog   283 TVVYQGKCSHCMRIGVGIPLSGNVGRLREAISQETKIPFDQIVITEMYFDG------FHRSFFDT 341

  Fly   564 -----------LHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAES 617
                       |.|.|.....||:..:.:.                 ::.:|.|.:         
 Frog   342 DDLDTIHESDCLFAFETPETFPSEGILSQR-----------------AICVNNNQN--------- 380

  Fly   618 VDQDDASLASLGAGDGQANDGLEQTNGQTEDSTTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPS 682
                            ....|.:|....:..|..:.|.....||..|                  
 Frog   381 ----------------YVRHGTDQHRLYSSGSVRNPVNRCSTSDRIV------------------ 411

  Fly   683 STASLTAPSKTYMDSNGN--AQP--PGEKRDDTPEHMDKDSLEEDENDSGIATSPAPTATNSSTS 743
                |...::.|...:|.  .||  ...:|:.|.:.:.|:.||:      :.....|||......
 Frog   412 ----LLVCNRAYSGQHGKRFGQPFVLHLERNITWDILQKEILEK------MQYYLRPTACVQVCP 466

  Fly   744 TSATGNNNSVAGSGLSGSSGALEDPLAPASLVTA--GLSEKGASVIRQVSVGAEQGASNGTEDAD 806
            .|.    ..|...|::......|.||...::..|  .....||:.::.|            .:.|
 Frog   467 FSL----RVVTAVGITYLLPQEEKPLCHPTVERALKSCGPGGAAHVKLV------------VEWD 515

  Fly   807 GEAK----AIEQPEKTPSQAQAMAQAQARTKRVRTQSYSDWSTTIAPRYQCEDGECSVQSCLNNF 867
            .|.|    ...:.|..|.......|.:                 |..:.||    |::..|.:.:
 Frog   516 RETKEYLFGSTEEEYVPDAESVRLQRE-----------------IHHQPQC----CTLAQCFHLY 559

  Fly   868 TAVELMTGQNKVGCDSCTQRINGSDPKAKSVNTNATKQLLVSSPPAVLILHLKRF-QLGPRCIFR 931
            |..|.:...|...|..|.|...||            .:|.:.:.|.||||||||| |.|.|.:  
 Frog   560 TKEEQLAPGNAWRCPHCKQLQQGS------------IKLSLWTLPDVLILHLKRFRQDGDRRL-- 610

  Fly   932 KLTRPVSYP-NLLDIAAFCGSKVK---NLP----------NIDRKQKKLLYALYGVVEHSGGMYG 982
            ||...|.:| ..||:......:.:   :||          ::.|..:..:|.||.|..|.|.|.|
 Frog   611 KLQNMVRFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYSLGRDPEDFIYDLYAVCNHHGTMQG 675

  Fly   983 GHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFS 1047
            ||||||.|                                                         
 Frog   676 GHYTAYCK--------------------------------------------------------- 683

  Fly  1048 NSSSNSSTSDESQTPATPLEEQQTQQAQQPQQPQQLEEAANVRAPPGKWYYVSDSRVQEVSEDTA 1112
            ||..                                          |.||...||.||.:.||..
 Frog   684 NSVD------------------------------------------GLWYCFDDSDVQPLPEDDV 706

  Fly  1113 LKAQAYLLFYER 1124
            ....||:|||:|
 Frog   707 CAPTAYILFYQR 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334
Peptidase_C19 307..>512 CDD:271592 63/212 (30%)
Peptidase_C19K <849..1123 CDD:239132 65/288 (23%)
usp31XP_002932037.2 UBP12 <92..719 CDD:227847 186/889 (21%)
PTZ00449 <965..1245 CDD:185628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.