DRSC/TRiP Functional Genomics Resources

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Protein Alignment NAAT1 and Slc6a1

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_077347.1 Gene:Slc6a1 / 79212 RGDID:620533 Length:599 Species:Rattus norvegicus


Alignment Length:612 Identity:207/612 - (33%)
Similarity:331/612 - (54%) Gaps:62/612 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ATNAASTEKTDA----EKPTA-------------ERTNWGNGLEFLMSCISVSVGLGNVWRFPFT 67
            |....|||.::|    :||..             :|..|....:|||||:..::|||||||||:.
  Rat     9 ADGQISTEVSEAPVASDKPKTLVVKVQKKAGDLPDRDTWKGRFDFLMSCVGYAIGLGNVWRFPYL 73

  Fly    68 AYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFTSQGTVKIWSVVPGFVGVGYGQAFGTICIIS 132
            ..:||||||||||.:.|...|.|::.||..:||:||.|.:.:|.:.|.|.|||...|..:..:..
  Rat    74 CGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNI 138

  Fly   133 YYSSLLALTLYYLFVSFQSELPWSYCRDEWTNCVNSRPQEYVDNLLTGVSLANESARNLSGIVAN 197
            ||..:::..:|||:.||.:.|||..|.:.|.          .|...:..||.|.:  |::..|. 
  Rat   139 YYIVIISWAIYYLYNSFTTTLPWKQCDNPWN----------TDRCFSNYSLVNTT--NMTSAVV- 190

  Fly   198 DETEKLQSSSELYFLNVVIKEKLDISDGVGDPD---WKLTLALFVAWVVIFLVIMRGVKSSGKAA 259
                      |.:..|:     ..::||:..|.   |.|.:.|.:|||:::..|.:||..:||..
  Rat   191 ----------EFWERNM-----HQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVV 240

  Fly   260 YFLALFPYVVLFVLLIRAVTLEGARDGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIM 324
            ||.|.:||::|.:|..|.|||.||::||||::.|.:.:|.:..||.:|..|.|||..:|.|.:|.
  Rat   241 YFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIA 305

  Fly   325 FASYNRFDHGIYRDAMIVTTLDTLTSLLGGITIFAILGNLAHNLQIENIRDVVRSGTGLAFISYP 389
            ..|||.|.:.:|||::||..:::.||:..|..||:|:|.:|| :...:|.||..||.||||::||
  Rat   306 LGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAH-VTKRSIADVAASGPGLAFLAYP 369

  Fly   390 DAISKFQAVPQLFSVLFFFMLFVLGIGSIVALQSTIVTIICDQF-KGWKYWKVALTTSVC--GFL 451
            :|:::....| |:::|||.||.:|||.|........:|.:.|:: :..:..:.....:||  .:|
  Rat   370 EAVTQLPISP-LWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELFIAAVCIVSYL 433

  Fly   452 MGLVYVTPGGQWILTLVDFY--GGTYVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWR 514
            :||..:|.||.::..|.|:|  .|..::| |..||...|.|.||:..|.|:|:.|...|..::|:
  Rat   434 IGLSNITQGGIYVFKLFDYYSASGMSLLF-LVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWK 497

  Fly   515 VCWSFFTPVMMIIIFIYSMVTIEPIKYSELYFPEAANIAGWLLFAIGAAQFPLWGLWYISRHPQG 579
            :|||||||:::..:|::|.|.:.|:......||:.....|||:........|.: :.|:....:|
  Rat   498 LCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVGWLMALSSMVLIPGY-MAYMFLTLKG 561

  Fly   580 TYWKSLKASLKPSD-----RWGPANPE 601
            :..:.|:..::||:     ..||..|:
  Rat   562 SLKQRLQVMIQPSEDIVRPENGPEQPQ 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 182/500 (36%)
Slc6a1NP_077347.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 5/13 (38%)
SLC6sbd_GAT1 2..599 CDD:212075 207/612 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 3/12 (25%)
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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