DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NAAT1 and slc6a4b

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001170930.1 Gene:slc6a4b / 664770 ZFINID:ZDB-GENE-060314-2 Length:591 Species:Danio rerio


Alignment Length:580 Identity:193/580 - (33%)
Similarity:307/580 - (52%) Gaps:64/580 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TAERTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMG 99
            |..|..|...::||:|.|..:|.||||||||:..|:||||||||||:::....|.|::|:|:.:|
Zfish    35 TESRDKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQNGGGAFLIPYVLMAVFGGVPLFYMELALG 99

  Fly   100 QFTSQGTVKIWS-VVPGFVGVGYGQAFGTICIIS-----YYSSLLALTLYYLFVSFQSELPWSYC 158
            ||...|.:.||. :.|.|.|:|:     .||||:     ||::::|..|:|.:.||.|.|||:.|
Zfish   100 QFHRTGAISIWKHICPIFKGIGF-----AICIIALYVSFYYNTIIAWALFYFYSSFSSTLPWTSC 159

  Fly   159 RDEWT--NCVNSRPQEYV--DNLLTGVSLANESARNLSGIVANDETEKLQSSSELYFLNVVIKEK 219
            .::|.  ||.|     |.  ||    |:..|.|.               ..:.|.|..||:...:
Zfish   160 DNDWNTENCTN-----YFGKDN----VTWTNYSR---------------SPAEEFYTRNVLAVHE 200

  Fly   220 LDISDGVGDPDWKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGAR 284
            ......||...|:|.|.||:.:.:::..:.:|||:|||..:..|..|||||.:|:||..||.||.
Zfish   201 SSGLGNVGYIRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLLILMIRGATLPGAW 265

  Fly   285 DGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTLT 349
            .|::|:|.|:|.:|...:||.:|..|.||||..|.|.::..:|||.|.:..||||::.:.::.||
Zfish   266 KGVVFYLNPKWEKLKETSVWVDAAAQIFFSLGPGFGVLLALSSYNPFTNNCYRDAIVTSLVNCLT 330

  Fly   350 SLLGGITIFAILGNLAHNLQIENIRDVVR-SGTGLAFISYPDAISKFQAVPQLFSVLFFFMLFVL 413
            |.:.|..||.:||.:|....: |:.||.| .|..|.||:||:||:.... ...|:::||.|:..|
Zfish   331 SFVSGFVIFTVLGYMAEQRNV-NVEDVARDKGPSLLFITYPEAIANMVG-STFFAIIFFVMMITL 393

  Fly   414 GIGSIVALQSTIVTIICDQFKGWKYWKVALTTSVCGFLMGLVYV---------TPGGQWILTLVD 469
            |:.|.......|:|.:.|::......:..|      |::|||.|         |.||.:::.|::
Zfish   394 GLDSTFGGLEAIITAVMDEYPDVLSHRREL------FVLGLVVVCFLGSLSTLTKGGAYVVKLLE 452

  Fly   470 FYGGTYVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWRVCWSFFTPVMMIIIFIYSMV 534
            .:|....:..:...|...:.|.||:..|.:||:.|......|:|:|||...:|..:..|.|.|::
Zfish   453 EFGVGSSIIAIVFLEATAVSWFYGINRFSNDIKSMLGYTPGLFWKVCWVAISPAFLAYIIISSLL 517

  Fly   535 TIEPIKYSELYFPEAANIAGWLLFAIGAAQF---PLWGLWYISRHPQGTYWKSLKASLKP 591
            ..:.:...:..||:.:...|::   |||:.|   |::.::.:...| |:..:.|...|:|
Zfish   518 NPQTLTLFDYEFPDWSITVGYI---IGASSFIWIPIYMVYKLVWTP-GSLKQRLAVCLRP 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 177/512 (35%)
slc6a4bNP_001170930.1 SLC6sbd_SERT 38..574 CDD:271399 192/577 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.