DRSC/TRiP Functional Genomics Resources

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Protein Alignment NAAT1 and Slc6a17

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:639 Identity:201/639 - (31%)
Similarity:320/639 - (50%) Gaps:124/639 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GATNAASTEKTDAEKPTAERTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIV 83
            |.....:.|:.|||    :|..|.:.|:::::.|..||||||:||||:...:|||||:|:||:::
  Rat    45 GGKQKVAEEELDAE----DRPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVL 105

  Fly    84 LFLIGKPMYYLEMIMGQFTSQGTVKIWS-VVPGFVGVGYGQAFGTICIISYYSSLLALTLYYLFV 147
            |.:||.|:::||:.:||...:|::.:|. |.|...|:|:......:.:..||:.::..:::|.|.
  Rat   106 LIIIGIPLFFLELAVGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFK 170

  Fly   148 SFQSELPWSYCRDEWTNCVNSRPQEYVDNLLTGVSLANESARNLSGIVANDETEKLQSSSELYFL 212
            |||..||||.|                           ...||  |.||..|.|..:||:..||.
  Rat   171 SFQYPLPWSEC---------------------------PVIRN--GTVAVVEPECEKSSATTYFW 206

  Fly   213 NVVIKEKLDISDGV---GDPDWKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLL 274
               .:|.||||:.:   |..:||:|:.|.|||.::.:.:::|::||||..||.:|||||||...|
  Rat   207 ---YREALDISNSISESGGLNWKMTVCLLVAWSIVGMAVVKGIQSSGKVMYFSSLFPYVVLACFL 268

  Fly   275 IRAVTLEGARDGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDA 339
            :|.:.|.||.||||....|:..::|:|.||:||..|.||:|.:|.|.:|.|:|||:.|:..:.||
  Rat   269 VRGLLLRGAVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDA 333

  Fly   340 MIVTTLDTLTSLLGGITIFAILGNLAHNLQ----IENI-------------RDVVR--------- 378
            .:|:.::..||:|..:.:||:||..|:.:.    :||.             ||::.         
  Rat   334 ALVSFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLT 398

  Fly   379 -------------------------------------SGTGLAFISYPDAISKFQAVPQLFSVLF 406
                                                 .|||||||::.:|::.|.|.| .:||:|
  Rat   399 TKDYSEMYNVIMTVKEKQFSALGLDPCLLEDELDKSVQGTGLAFIAFTEAMTHFPASP-FWSVMF 462

  Fly   407 FFMLFVLGIGSIVALQSTIVTIICDQFKGWKYWKVALTTSVC--GFLMGLVYVTPGGQWILTLVD 469
            |.||..||:||::...:.|.|.|.|.|   |..|...|...|  .|.:||::|...|.:.:|:.|
  Rat   463 FLMLINLGLGSMIGTMAGITTPIIDTF---KVPKEMFTVGCCVFAFFVGLLFVQRSGNYFVTMFD 524

  Fly   470 FYGGTYVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWRVCWSFFTPVMMIIIFIYSMV 534
            .|..|..:.::.|.|...:.|:||.:.|..::..|...|...::...|.|.:|:.|.::...|::
  Rat   525 DYSATLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFYMWKFVSPLCMAVLTTASII 589

  Fly   535 T--IEPIKYSE----------LYFPEAANIAGWLLFAIGAAQFPLWGLWYISRH 576
            .  :.|..||.          ||||..|  ...|:..|..|..|: .:.:|.||
  Rat   590 QLGVSPPGYSAWIKEEAAERYLYFPNWA--MALLITLIAVATLPI-PVVFILRH 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 179/561 (32%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 196/620 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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