DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NAAT1 and Slc6a3

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_036826.1 Gene:Slc6a3 / 24898 RGDID:3715 Length:619 Species:Rattus norvegicus


Alignment Length:626 Identity:214/626 - (34%)
Similarity:333/626 - (53%) Gaps:54/626 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MELKGVQPSNGSSNGSGNGATNAASTEKTDAEKPTAERTNWGNGLEFLMSCISVSVGLGNVWRFP 65
            :||..|:..||..      .||:.............||..|...::||:|.|..:|.|.||||||
  Rat    29 VELILVKEQNGVQ------LTNSTLINPPQTPVEAQERETWSKKIDFLLSVIGFAVDLANVWRFP 87

  Fly    66 FTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFTSQGTVKIWSVVPGFVGVGYGQAFGTICI 130
            :..|:|||||||:||::.:.:.|.|::|:|:.:|||..:|...:|.:.|...|||:     |:.:
  Rat    88 YLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVGF-----TVIL 147

  Fly   131 IS-----YYSSLLALTLYYLFVSFQSELPWSYCRDEWT--NCVNSRPQEYVDNLLTGVSLANESA 188
            ||     :|:.::|..|:|.|.||..:|||.:|.:.|.  ||.::    :..|...|:.|     
  Rat   148 ISFYVGFFYNVIIAWALHYFFSSFTMDLPWIHCNNTWNSPNCSDA----HASNSSDGLGL----- 203

  Fly   189 RNLSGIVANDETEKLQSSSELYFLNVVIKEKLDISDGVGDPDWKLTLALFVAWVVIFLVIMRGVK 253
                     ::|.....::|.:...|:...:....|.:|.|.|:||..|.:..|:::..:.:|||
  Rat   204 ---------NDTFGTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVK 259

  Fly   254 SSGKAAYFLALFPYVVLFVLLIRAVTLEGARDGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVG 318
            :|||..:..|..|||||..||:|.|||.||.|||..:|...:..|...:||.:|..|..|||.||
  Rat   260 TSGKVVWITATMPYVVLTALLLRGVTLPGAMDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVG 324

  Fly   319 SGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLLGGITIFAILGNLA--HNLQIENIRDVVRSGT 381
            .|.:|.|:|||:|.:..||||:|.|::::|||...|..:|:.||.:|  ||:.   ||||...|.
  Rat   325 FGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFSSGFVVFSFLGYMAQKHNVP---IRDVATDGP 386

  Fly   382 GLAFISYPDAISKFQAVPQLFSVLFFFMLFVLGIGSIVALQSTIVTIICDQFKGWKYWKVALTTS 446
            ||.||.||:||:.. .:...::.:||.||..|||.|.:....:::|.:.|:|:.....:...|..
  Rat   387 GLIFIIYPEAIATL-PLSSAWAAVFFLMLLTLGIDSAMGGMESVITGLVDEFQLLHRHRELFTLG 450

  Fly   447 V--CGFLMGLVYVTPGGQWILTLVD-FYGGTYVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRR 508
            :  ..||:.|..||.||.::.||:| |..||.::|.:.| |..|:.|.||:|.|.|||:.|..:|
  Rat   451 IVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLI-EAIGVAWFYGVQQFSDDIKQMTGQR 514

  Fly   509 VSLYWRVCWSFFTPVMMIIIFIYSMVTIEPIKYSELYFPEAANIAGWLLFAIGAAQFPLWGLWYI 573
            .:||||:||...:|..::.:.:.|:||..|..|....||:.||..||::.....|..|::..:..
  Rat   515 PNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPHYGAYIFPDWANALGWIIATSSMAMVPIYATYKF 579

  Fly   574 SRHPQGTYWKSLKASLKPS------DRWGPANPEIRREWVI 608
            ...| |::.:.|..::.|.      || |.......|.|::
  Rat   580 CSLP-GSFREKLAYAITPEKDHQLVDR-GEVRQFTLRHWLL 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 183/504 (36%)
Slc6a3NP_036826.1 SLC6sbd_DAT1 60..613 CDD:212083 204/582 (35%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 6/29 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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