DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NAAT1 and snf-11

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_505873.2 Gene:snf-11 / 191770 WormBaseID:WBGene00004910 Length:610 Species:Caenorhabditis elegans


Alignment Length:593 Identity:200/593 - (33%)
Similarity:313/593 - (52%) Gaps:51/593 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AERTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQ 100
            |||..|.:..:|:||||..::|||||||||:..|:||||||||||.|.|...|.|::.||...||
 Worm     8 AEREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFILETSWGQ 72

  Fly   101 FTSQGTVKIWSVVPGFVGVGYGQAFGTICIISYYSSLLALTLYYLFVSF-QSELPWSYCRDEWTN 164
            ..|.|.:.::.:.|.|.|||...|.....:..||..:|:....||:.|| .|::||..|...| |
 Worm    73 LMSVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVPWKNCDHAW-N 136

  Fly   165 CVNSRPQEYVDNLLTGVSLANESARNLS-----GIVANDET----------EKLQ----SSSELY 210
            ..|.| .||       |.:..:|.|.::     .::.:|..          ||:.    |:::|.
 Worm   137 TPNCR-SEY-------VKIPCDSNRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVCSAADLS 193

  Fly   211 FLNVVIKE-----KLDISDGVGDPD---WKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPY 267
            .::.| ||     .|.||.|:.:|.   |.|.|.|.:.|::.:|.|.:|||.:||..|..|.|||
 Worm   194 VVSPV-KEFWNHRVLGISSGLENPGGIRWDLALFLLLVWIICYLCIFKGVKWTGKVVYITASFPY 257

  Fly   268 VVLFVLLIRAVTLEGARDGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFD 332
            ::||.||||.:|||||..|:.|:|:|.:.:||...||.:||.|.|||..:|.|.::...|||:|:
 Worm   258 MMLFCLLIRGLTLEGAGVGLEFYLKPDFSKLLESKVWVDAVTQVFFSYGLGLGALVALGSYNKFN 322

  Fly   333 HGIYRDAMIVTTLDTLTSLLGGITIFAILGNLAHNLQIENIRDVVRSGTGLAFISYPDAISKFQA 397
            :.:|:.|:.|..:::.||:..|..||:.:|.:| ..|.:::.:|.::|.||.|::||..|.:. .
 Worm   323 NNVYKQALTVCFVNSGTSVFAGFVIFSFIGFMA-TQQEKSVAEVAQAGPGLLFLAYPSGILQL-P 385

  Fly   398 VPQLFSVLFFFMLFVLGIGSIVALQSTIVTIICDQF---KGWKYWKVALTTSVC--GFLMGLVYV 457
            ..|.:|.|||.|:..||:.|.........|.|.|:|   :..||.:......:|  .:|:||..|
 Worm   386 YTQFWSCLFFLMVLFLGVDSQFCTMEGFFTAIIDEFPQIRRKKYGREIFVGVICVISYLIGLTTV 450

  Fly   458 TPGGQWILTLVDFYGGT-YVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWRVCWSFFT 521
            |.||.::..|.|||..: :.:..|..||...|.|..|:..:.:.::.|.....|.:|:.||.|.|
 Worm   451 TEGGFYVFQLFDFYAASGWALLWLLFFECIAISWSLGIDRWYEHMKSMIGYYPSAWWKFCWVFAT 515

  Fly   522 PVMMIIIFIYSMVTIEPIKYSELY---FPEAANIAGWLLFAIGAAQFPLWGLWYISRHPQGTYWK 583
            |.:...:.::.::..:|::. :.|   :|...:|.||.|........|.:.:|...:.| ||..:
 Worm   516 PSVCFGVLLFGLIKYQPLRI-DAYNYDYPVWGHIFGWFLSLSSMLCIPGYAIWIWFKTP-GTVQE 578

  Fly   584 SLKASLKP 591
            .:|...:|
 Worm   579 KIKLLCRP 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 183/526 (35%)
snf-11NP_505873.2 SLC6sbd-TauT-like 10..586 CDD:271387 197/589 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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