DRSC/TRiP Functional Genomics Resources

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Protein Alignment NAAT1 and snf-12

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:644 Identity:173/644 - (26%)
Similarity:288/644 - (44%) Gaps:88/644 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KTDA---EKPTAERTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGK 89
            :||.   .|....|..|....:|.:||:...||:|:..|||...|::|||.|.|||:..|...|.
 Worm   144 RTDLLRFSKQNDRRELWRTQKDFFLSCLGFMVGVGHTMRFPAKVYQHGGGVFFIPYLFSLIFFGL 208

  Fly    90 PMYYLEMIMGQFTSQ-GTVKIWSVVPGFVGVGYGQAFGTICIISYYSSLLALTLYYLFVSFQ--- 150
            |:.:|.:.:||:|.| .......::|...|||:......|.:..||:.::|..::|.|.|.:   
 Worm   209 PLVFLHLSLGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLL 273

  Fly   151 --SELPWSYCRDEW---TNCVNSRPQEYVDNLLTGVSLANESARNLSGIVANDETEKLQSSSELY 210
              .||||..|||||   ..|.|      :.||        .|..|.:..:         ::.|.:
 Worm   274 LGDELPWETCRDEWQLDNRCCN------LHNL--------HSCFNSTNSI---------TAPEAF 315

  Fly   211 FLNVVIKEKLDISDGVGDPDWKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLI 275
            |.:.|:.........:|.....|.|:|..||:::|..:.:|:.|..:.....|..||::|.:||:
 Worm   316 FHSEVLSLSTFGDFALGPLQSHLVLSLAAAWLLVFFGVFKGLGSIAQTMNVTATVPYLLLSILLL 380

  Fly   276 RAVTLEGARDGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAM 340
            |.::|.||..|:.|.......:|....:||.|..|.|:.|.:.:||:|..|:::|:.:.||||::
 Worm   381 RGISLPGANKGLTFLFTVDSTKLWKWQIWKSAAEQVFYELGIDAGPLISMAAFSRYRNNIYRDSV 445

  Fly   341 IVTTLDTLTSLLGGITIFAILGNLAHNLQIENIRDVVR-SGTGLAFISYPDAISKFQAVPQLFSV 404
            ::..:|.|||.|.|:.||:.:|.:|.... .|:.||:: ....|:|..|| .::.|.....|::.
 Worm   446 LLVIMDALTSCLSGMVIFSFVGFIASESN-SNVNDVLKHDPLYLSFTVYP-GVTSFMYWGGLWAT 508

  Fly   405 LFFFMLFVLGIGSIVALQSTIVTIICDQF--KGWKYWKVALTTSVC--GFLMGLVYVTPGGQWIL 465
            |||.||.:..|.:..|....|.:...:.|  |. |..:..|...:|  ||.:||.....||.::.
 Worm   509 LFFGMLVLAAIDAEFAWLEMIASAFMNHFSMKN-KAVENRLLAFLCLAGFFLGLPLCAQGGIFVF 572

  Fly   466 TLVDFYGGTYVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRV--------------------- 509
            ..::.....:..|.||:..:|.:.:|||:.|:..||..|.  ||                     
 Worm   573 HAIENLNANWNSFSLALLSVAIVCYVYGIDNYLTDISAML--RVPRIQISKATRLKEKLIYFFGP 635

  Fly   510 -SLYWRVCWSFFTPVMMIIIFIYSMVTIEPIKYSELYFPEAANIAGWLLFAIGAAQFPLWGLWYI 573
             .:|.:....|..||::.::.:.|::..:.|.::....|....|..|::........||.....|
 Worm   636 GGIYIKFSLCFICPVILTVLLVASVLGYQRISFAGRPIPIDYEIVAWIVMIGPLLVVPLVAFMQI 700

  Fly   574 SR-HPQGTYWKSL----------KASLKPSDRW--------GPANPEIRREWVIFKNQK 613
            .: ..:|...|||          ..||:|.|.:        .|  |..||...||.:::
 Worm   701 RQIRNEGKLLKSLFDTSEWRESQDDSLEPKDLYMRQSGKFESP--PNRRRTPTIFTHRE 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 147/528 (28%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 147/529 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3905
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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