DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NAAT1 and snf-1

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_491491.2 Gene:snf-1 / 172119 WormBaseID:WBGene00004900 Length:617 Species:Caenorhabditis elegans


Alignment Length:538 Identity:129/538 - (23%)
Similarity:233/538 - (43%) Gaps:59/538 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFT 102
            |..|.:.:||::|.::....:.|....|....||||.||...|.||:.::..|...:||.:||.|
 Worm    21 RDLWPSKIEFIVSAMAYLFAMTNFLNLPKLILENGGVAFAAAYAIVVGVLCMPTMVMEMSIGQVT 85

  Fly   103 SQGTV-KIWSVVPGFVGVGYGQAFGTICII---SYYSSLLALTLYYLFVSF---QSELPWSYCRD 160
            .:..| ..:.:.|.|.|:|..|...|:.::   :.:.|.|.|.|||.|.:|   :|.|||..|: 
 Worm    86 GRAPVLAFYHLFPVFRGIGVSQILFTMVVLACMTKFLSTLCLFLYYYFWTFHAGRSGLPWLNCK- 149

  Fly   161 EWTNCVNSRPQEYVDNLLTGVSLANESARNLSGIV-ANDETEKLQS-SSELYFLNVVIKEKLDIS 223
                   :.|:        .||.....|.:::.|. .|:....:|: ||.:.||..:.:....|:
 Worm   150 -------AFPE--------FVSQPCREAGSITNITQINNRLNTIQAESSMMQFLTTLERPSESIA 199

  Fly   224 DGVGDPDWKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGARDGI- 287
            | ..|..:.:.:|....|:.||:.|..||:..||...|:.:..:..|.|..:|:.||.|..:.: 
 Worm   200 D-FKDFQYPILIAQGAIWIAIFVAICFGVRFVGKTVAFVLMLAFSSLLVFFLRSATLGGVTEILE 263

  Fly   288 LFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLL 352
            :::....|.:|.:..||:.|:.|......:|.|..|..:||.:..:.:..|::.::....:.|.:
 Worm   264 IYWKATDWEKLADYQVWRLAIEQAILGTGIGYGAFITMSSYMKRSNNLVCDSIFLSVWHLIISFV 328

  Fly   353 GGITIFAILGNLAHNLQIENIRDVVRSGTG-----LAFISYPDAISKFQAVPQLFSVLFFFMLFV 412
            ..::|..|:|.|:..|.| :..:::.:|..     ||::||         :|:|:|.:...:...
 Worm   329 QTMSIICIVGYLSMKLGI-HPTELLETGEDQMWYMLAYVSY---------LPKLWSGVLLTICIC 383

  Fly   413 LGIGSIVALQSTIVTIICDQF-KGWKYW--KVALTTSVCGFLMGLV--YVTPGGQWILTLVDFYG 472
            .....|..|..::::...|.| :.|...  :..|...||.|..||.  :.|..|:....|.....
 Worm   384 TMFSVITILALSVLSTFEDAFGENWSKCCRRFFLALFVCLFCFGLTVYFATNAGRHAYELATRSI 448

  Fly   473 GTYVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWRVCWSFFTPVMMI----IIFIYSM 533
            ....::.:...||....|.|.......|:..|...|....:...:.:||.::.|    :.|:.::
 Worm   449 KYCTIYFILTAELFATAWFYCAHKLGKDLHNMMRSRCCSCFGHFFLYFTYLLPILPAGVAFLNAL 513

  Fly   534 --------VTIEPIKYSE 543
                    ..|...||||
 Worm   514 DYKFSSFSAPIHEWKYSE 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 123/516 (24%)
snf-1NP_491491.2 SNF 21..554 CDD:264495 129/538 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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