DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NAAT1 and mod-5

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_491095.3 Gene:mod-5 / 171879 WormBaseID:WBGene00003387 Length:671 Species:Caenorhabditis elegans


Alignment Length:575 Identity:179/575 - (31%)
Similarity:298/575 - (51%) Gaps:50/575 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFT 102
            |..|...:|||::.:..:|.|||:||||...|::|||||||||.|:|.:.|.||:|:|:::|||.
 Worm   100 RDKWATKMEFLLAVVGYAVDLGNIWRFPSVCYKHGGGAFLIPYFIMLMIGGLPMFYMELVLGQFH 164

  Fly   103 SQGTVKIW-SVVPGFVGVGYGQAFGTICIIS-----YYSSLLALTLYYLFVS----FQSELPWSY 157
            ..|.|.|| .|.|.|.|:|||     ||.|.     :|::::|..:|:..||    :.||:||:.
 Worm   165 RSGCVSIWRKVCPLFRGIGYG-----ICCICTFIAIFYNAIIAQAVYFAIVSLSKIWDSEVPWAS 224

  Fly   158 CRDEWTNCVNSRPQEYVDNLLTGVSLANESARNLSGIVANDETEKLQSSSELYFLNVVIKEKLDI 222
            |.:.|     :.|:               .:.:|:..::.:.|.....|.|.|...|:..:|...
 Worm   225 CGNPW-----NTPR---------------CSDDLNVTISRNGTPLTTPSEEYYLYKVLEVQKSTG 269

  Fly   223 SDGVGDPDWKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGARDGI 287
            .|.:|.....:.:.|...:::::..:.:|.:||||..:..|..||::|.:||||.:.|.||::|:
 Worm   270 FDDLGGVKTSMAVCLLAVFIMVYFALWKGPQSSGKIVWVTATAPYIILSILLIRGLLLPGAKNGL 334

  Fly   288 LFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLL 352
            .:::.|.:.:|.:|.||..|..|.||||..|.|.::..:|||.|::..||||:..:.::..||..
 Worm   335 YYYVTPDFEKLKDPAVWSAAATQIFFSLGPGFGVLLALSSYNDFNNNCYRDAVTTSIINCATSFF 399

  Fly   353 GGITIFAILG--NLAHNLQIENIRDVVRSGTGLAFISYPDAISKFQAVPQLFSVLFFFMLFVLGI 415
            .|..:|:.||  :|..|..|..:  |......|.||.||.|::... ....:|.:||.||..|||
 Worm   400 SGCVVFSTLGYMSLLTNKPINEV--VGEHDASLIFIVYPQALATMD-YSCFWSFIFFVMLITLGI 461

  Fly   416 GSIVALQSTIVTIICDQ----FKGWKYWKVALTTSVCGFLMGLVYVTPGGQWILTLVDFYGGTYV 476
            .|..|.....:|..||:    .|..|::  .|...:..:.:....::.|||:::..:|.||.:..
 Worm   462 DSTFAGIEAFITGFCDESRFLSKNRKWF--VLVICIIYYFLSFPAISYGGQFVIPFLDEYGVSLS 524

  Fly   477 VFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWRVCWSFFTPVMMIIIFIYSMV--TIEPI 539
            |..:...|:..:.|.||:..|..||..|......:||||||: .:||.:.:|||.::.  :.:||
 Worm   525 VLFIVTCEMIAVCWFYGVDQFSKDIRAMLGFYPGIYWRVCWT-CSPVFISVIFIMTVYNSSFKPI 588

  Fly   540 KYSELYFPEAANIAGWLLFAIGAAQFPLWGLWYISRHPQGTYWKSLKASLKPSDR 594
            :.:...||..:.|.||.|..:.....|::.:.|: ....||.::..:.::.|..|
 Worm   589 QMASYTFPWWSVILGWFLRLLSVLAIPVFAIIYL-LSGTGTLYERFRWAITPQQR 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 164/508 (32%)
mod-5NP_491095.3 SLC6sbd_SERT-like 100..639 CDD:271388 177/570 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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