DRSC/TRiP Functional Genomics Resources

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Protein Alignment NAAT1 and Slc6a4

DIOPT Version :10

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_034614.2 Gene:Slc6a4 / 15567 MGIID:96285 Length:630 Species:Mus musculus


Alignment Length:621 Identity:208/621 - (33%)
Similarity:335/621 - (53%) Gaps:68/621 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KGV----------QPSNG----SSNGSGNGATNA--ASTEKTDAEKPTAERTNWGNGLEFLMSCI 52
            |||          |.|||    .|..:|:.|.::  |:|....||....||..||..::||:|.|
Mouse    29 KGVPTPADKAGPGQISNGYSAVPSTSAGDEAPHSTPAATTTLVAEIHQGERETWGKKMDFLLSVI 93

  Fly    53 SVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFTSQGTVKIW-SVVPGF 116
            ..:|.|||:||||:..|:|||||||:||.|:....|.|::|:|:.:||:...|.:.|| .:.|.|
Mouse    94 GYAVDLGNIWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIF 158

  Fly   117 VGVGYGQAFGTICII-----SYYSSLLALTLYYLFVSFQSELPWSYCRDEWT--NCVNSRPQEYV 174
            .|:||     .||||     |||::::|..||||..||..:|||:.|::.|.  ||.|...|   
Mouse   159 KGIGY-----AICIIAFYIASYYNTIIAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFAQ--- 215

  Fly   175 DNLLTGVSLANESARNLSGIVANDETEKLQSSS---ELYFLNVV-IKEKLDISDGVGDPDWKLTL 235
            ||:                      |..|.|:|   |.|..:|: |.:...:.| :|...|:|.|
Mouse   216 DNI----------------------TWTLHSTSPAEEFYLRHVLQIHQSKGLQD-LGTISWQLAL 257

  Fly   236 ALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGARDGILFFLEPQWGELLN 300
            .:.:.:.:|:..|.:|||:|||..:..|.|||:||.|||:|..||.||..|::|:|:|.|.:||.
Mouse   258 CIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGATLPGAWRGVVFYLKPNWQKLLE 322

  Fly   301 PTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLLGGITIFAILGNLA 365
            ..||.:|..|.||||..|.|.::.|||||:|::..|:||::.:.::.:||.:.|..||.:||.:|
Mouse   323 TGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMA 387

  Fly   366 HNLQIENIRDVVR-SGTGLAFISYPDAISKFQAVPQLFSVLFFFMLFVLGIGSIVALQSTIVTII 429
             .::.|::.:|.: :|..|.||:|.:||:...| ...|:::||.||..||:.|..|....::|.:
Mouse   388 -EMRNEDVSEVAKDAGPSLLFITYAEAIANMPA-STFFAIIFFLMLITLGLDSTFAGLEGVITAV 450

  Fly   430 CDQFKG-W---KYWKVALTTSVCGFLMGLVYVTPGGQWILTLVDFYGGTYVVFILAIFELAGIVW 490
            .|:|.. |   :.|.|.:....| .|..|:.:|.||.:::||::.|.....|..:|:.|...:.|
Mouse   451 LDEFPHIWAKRREWFVLIVVITC-ILGSLLTLTSGGAYVVTLLEEYATGPAVLTVALIEAVVVSW 514

  Fly   491 VYGLQNFCDDIEFMCNRRVSLYWRVCWSFFTPVMMIIIFIYSMVTIEPIKYSELYFPEAANIAGW 555
            .||:..||.|::.|.......:||:||...:|:.::.|....:::...::..:..:|..:.|.|:
Mouse   515 FYGITQFCSDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGY 579

  Fly   556 LLFAIGAAQFPLWGLWYISRHPQGTYWKSLKASLKP 591
            .:........|::.::.:...| ||..:.:..|:.|
Mouse   580 CIGTSSVICIPIYIIYRLISTP-GTLKERIIKSITP 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 183/509 (36%)
Slc6a4NP_034614.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 10/33 (30%)
5HT_transport_N 24..64 CDD:397524 10/34 (29%)
SLC6sbd_SERT 79..615 CDD:271399 193/571 (34%)
Interaction with RAB4A. /evidence=ECO:0000250 616..624
Blue background indicates that the domain is not in the aligned region.

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