DRSC/TRiP Functional Genomics Resources

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Protein Alignment NAAT1 and Slc6a4

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_034614.2 Gene:Slc6a4 / 15567 MGIID:96285 Length:630 Species:Mus musculus


Alignment Length:621 Identity:208/621 - (33%)
Similarity:335/621 - (53%) Gaps:68/621 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KGV----------QPSNG----SSNGSGNGATNA--ASTEKTDAEKPTAERTNWGNGLEFLMSCI 52
            |||          |.|||    .|..:|:.|.::  |:|....||....||..||..::||:|.|
Mouse    29 KGVPTPADKAGPGQISNGYSAVPSTSAGDEAPHSTPAATTTLVAEIHQGERETWGKKMDFLLSVI 93

  Fly    53 SVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFTSQGTVKIW-SVVPGF 116
            ..:|.|||:||||:..|:|||||||:||.|:....|.|::|:|:.:||:...|.:.|| .:.|.|
Mouse    94 GYAVDLGNIWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIF 158

  Fly   117 VGVGYGQAFGTICII-----SYYSSLLALTLYYLFVSFQSELPWSYCRDEWT--NCVNSRPQEYV 174
            .|:||     .||||     |||::::|..||||..||..:|||:.|::.|.  ||.|...|   
Mouse   159 KGIGY-----AICIIAFYIASYYNTIIAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFAQ--- 215

  Fly   175 DNLLTGVSLANESARNLSGIVANDETEKLQSSS---ELYFLNVV-IKEKLDISDGVGDPDWKLTL 235
            ||:                      |..|.|:|   |.|..:|: |.:...:.| :|...|:|.|
Mouse   216 DNI----------------------TWTLHSTSPAEEFYLRHVLQIHQSKGLQD-LGTISWQLAL 257

  Fly   236 ALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGARDGILFFLEPQWGELLN 300
            .:.:.:.:|:..|.:|||:|||..:..|.|||:||.|||:|..||.||..|::|:|:|.|.:||.
Mouse   258 CIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGATLPGAWRGVVFYLKPNWQKLLE 322

  Fly   301 PTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLLGGITIFAILGNLA 365
            ..||.:|..|.||||..|.|.::.|||||:|::..|:||::.:.::.:||.:.|..||.:||.:|
Mouse   323 TGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMA 387

  Fly   366 HNLQIENIRDVVR-SGTGLAFISYPDAISKFQAVPQLFSVLFFFMLFVLGIGSIVALQSTIVTII 429
             .::.|::.:|.: :|..|.||:|.:||:...| ...|:::||.||..||:.|..|....::|.:
Mouse   388 -EMRNEDVSEVAKDAGPSLLFITYAEAIANMPA-STFFAIIFFLMLITLGLDSTFAGLEGVITAV 450

  Fly   430 CDQFKG-W---KYWKVALTTSVCGFLMGLVYVTPGGQWILTLVDFYGGTYVVFILAIFELAGIVW 490
            .|:|.. |   :.|.|.:....| .|..|:.:|.||.:::||::.|.....|..:|:.|...:.|
Mouse   451 LDEFPHIWAKRREWFVLIVVITC-ILGSLLTLTSGGAYVVTLLEEYATGPAVLTVALIEAVVVSW 514

  Fly   491 VYGLQNFCDDIEFMCNRRVSLYWRVCWSFFTPVMMIIIFIYSMVTIEPIKYSELYFPEAANIAGW 555
            .||:..||.|::.|.......:||:||...:|:.::.|....:::...::..:..:|..:.|.|:
Mouse   515 FYGITQFCSDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGY 579

  Fly   556 LLFAIGAAQFPLWGLWYISRHPQGTYWKSLKASLKP 591
            .:........|::.::.:...| ||..:.:..|:.|
Mouse   580 CIGTSSVICIPIYIIYRLISTP-GTLKERIIKSITP 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 183/509 (36%)
Slc6a4NP_034614.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 10/33 (30%)
5HT_transport_N 24..64 CDD:281488 10/34 (29%)
SLC6sbd_SERT 79..615 CDD:271399 193/571 (34%)
Interaction with RAB4A. /evidence=ECO:0000250 616..624
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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