DRSC/TRiP Functional Genomics Resources

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Protein Alignment NAAT1 and slc6a4

DIOPT Version :9

Sequence 1:NP_572219.1 Gene:NAAT1 / 31457 FlyBaseID:FBgn0029762 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_017946918.1 Gene:slc6a4 / 100493853 XenbaseID:XB-GENE-22062972 Length:664 Species:Xenopus tropicalis


Alignment Length:627 Identity:215/627 - (34%)
Similarity:326/627 - (51%) Gaps:79/627 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PSNGSSNGSGNGAT------NAASTEKTDAEKPTAERTNWGNGLEFLMSCISVSVGLGNVWRFPF 66
            |.||..||...|:|      .|...|....:....||..|...::||:|.|..:|.||||||||:
 Frog    77 PCNGMRNGGDEGSTPTLTVLPACRAEIQHLQTEIGERETWSKKIDFLLSVIGYAVDLGNVWRFPY 141

  Fly    67 TAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFTSQGTVKIW-SVVPGFVGVGYGQAFGTICI 130
            ..|:||||||||||:|:....|.|::|:|:.|||:...|.:.|| .:.|.|.|:||     .||:
 Frog   142 VCYQNGGGAFLIPYVIMAVFGGIPLFYMELAMGQYHRNGCISIWRKICPLFKGIGY-----AICM 201

  Fly   131 IS-----YYSSLLALTLYYLFVSFQSELPWSYCRDEWT--NCVNSRPQEYVDNLLTGVSLANESA 188
            |:     ||::::|..||||..||:|||||:.|.:||.  ||.|     |..|  :.|..:|.|.
 Frog   202 IALYVAFYYNTIMAWALYYLIFSFRSELPWTSCLNEWNTGNCTN-----YFQN--SSVGWSNSSI 259

  Fly   189 RNLSGIVANDETEKLQSSSELYFLNVVIKEKLDISDG---VGDPDWKLTLALFVAWVVIFLVIMR 250
                            |.:|.::..:|:  ::..|.|   :|...|:|||.|.:.:.|::..|.:
 Frog   260 ----------------SPAEEFYTRLVL--QIHKSKGLHDLGGISWQLTLCLLLIFTVVYFSIWK 306

  Fly   251 GVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGARDGILFFLEPQWGELLNPTVWKEAVVQCFFSL 315
            |||:|||..:..|.|||:||.:||||..||.||..|:||:|:|.|.:||...||.:|..|.||||
 Frog   307 GVKTSGKVVWVTATFPYIVLALLLIRGATLPGAWRGVLFYLQPDWEKLLTTAVWVDAAAQIFFSL 371

  Fly   316 AVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLLGGITIFAILGNLA--HNLQIENI-RDVV 377
            ..|.|.::.|||||:|.:..|:||:|.:|::.:||.:.|:.||.:||.:|  .||.:..: :|  
 Frog   372 GPGFGVLLAFASYNKFHNNCYQDALITSTVNCMTSFMSGLVIFTVLGYMAEMRNLDVSEVAKD-- 434

  Fly   378 RSGTGLAFISYPDAISKFQAVPQLFSVLFFFMLFVLGIGSIVALQSTIVTIICDQFKGWKYWK-- 440
             :|..|.||:|.:||:...| ...|:::||.||..||:.|..|....::|.:.|:|.  ..|.  
 Frog   435 -TGPSLLFITYAEAIANMPA-STFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFP--HIWGKR 495

  Fly   441 ----VALTTSVCGFLMGLVYVTPGGQWILTLVDFYGGTYVVFILAIFELAGIVWVYGLQNFCDDI 501
                |.|..||| ||..|..:|.||.:::.|.:.|.....|..:...|...:.|.||:..||.|:
 Frog   496 RELFVFLLISVC-FLGALSTLTFGGAYMVKLFEEYATGPAVLTVVFLEAIAVSWFYGINQFCRDV 559

  Fly   502 EFMCNRRVSLYWRVCWSFFTPVMMIIIFIYSMVTIEPIKYSELYFPEAANIAGWLLFAIGAAQF- 565
            ..|.......:|::||....|:.::.|....|.:...::.....:|....:.|   :.||.:.| 
 Frog   560 REMLGFSPGWFWKICWVAICPLFLLFIICSFMSSPPDLRLFNYQYPSWTVVLG---YCIGTSSFI 621

  Fly   566 --PLWGLWYISRHPQGTYWKSLKASLKPSDRWGPANPEIRRE 605
              |.:.::.::..|.....:.||:          ..||:.||
 Frog   622 CVPAYMVYLLTSTPGSIKERFLKS----------ITPEVSRE 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAAT1NP_572219.1 SLC6sbd 40..533 CDD:271359 190/512 (37%)
slc6a4XP_017946918.1 5HT_transport_N 48..91 CDD:367522 6/13 (46%)
SLC5-6-like_sbd 113..649 CDD:382020 201/585 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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