DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SK and KCNN4

DIOPT Version :9

Sequence 1:NP_001284887.1 Gene:SK / 31456 FlyBaseID:FBgn0029761 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_002241.1 Gene:KCNN4 / 3783 HGNCID:6293 Length:427 Species:Homo sapiens


Alignment Length:455 Identity:186/455 - (40%)
Similarity:259/455 - (56%) Gaps:56/455 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 LGKRKALFEKRKRISDYALVMGMFGIIVMVIENELSSAGVYTKASFYSTALKTLISVSTVILLGL 533
            |.:||.|.|:.|.::.:|||:...||.:||:..|:...|..:.| .|...:|..||:||.:||.|
Human    12 LRRRKRLLEQEKSLAGWALVLAGTGIGLMVLHAEMLWFGGCSWA-LYLFLVKCTISISTFLLLCL 75

  Fly   534 IVAYHALEVQVRLFMIDNCADDWRIAMTWQRISQIGLELFICAIHPIP--GEYYFQWTTKLANKN 596
            |||:||.|||  |||.||...|||:|:|.::.:||.|||.:|.:||.|  |....|         
Human    76 IVAFHAKEVQ--LFMTDNGLRDWRVALTGRQAAQIVLELVVCGLHPAPVRGPPCVQ--------- 129

  Fly   597 KTIG---TEMVPY-------DVALSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTR 651
             .:|   |...|:       :..|||.|.|||||:.|.:||.|.:..:||.|||||||::.|...
Human   130 -DLGAPLTSPQPWPGFLGQGEALLSLAMLLRLYLVPRAVLLRSGVLLNASYRSIGALNQVRFRHW 193

  Fly   652 FVLKTLMTICPGTVLLVFMVSLWIIASWTLRQCERFHDEEHANLLNAMWLIAITFLSVGFGDIVP 716
            ||.|..|...||.:||...:.||:..:|.|...||.......:|.:.:|||.||||::|:||:||
Human   194 FVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAERQAVNATGHLSDTLWLIPITFLTIGYGDVVP 258

  Fly   717 NTYCGRGIAVSTGIMGAGCTALLVAVVSRKLELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETW 781
            .|..|:.:.:.||:||..|||||||||:||||..:|||||||||||.|.||.:|.:||.||:|.|
Human   259 GTMWGKIVCLCTGVMGVCCTALLVAVVARKLEFNKAEKHVHNFMMDIQYTKEMKESAARVLQEAW 323

  Fly   782 LIYKHTRLVKRVNPGRVRTHQRKFLLAIYALRKVKMDQRKLMDNANTITDMAKTQNTVYEIISDM 846
            :.|||||   |......|.||||.|.||.|.|:|::..|||.:..|::.|::|....:|::..::
Human   324 MFYKHTR---RKESHAARRHQRKLLAAINAFRQVRLKHRKLREQVNSMVDISKMHMILYDLQQNL 385

  Fly   847 SSRQDAIEERLTNLEDKMQSIQEHMESLPDLLSRCLTQHQERIEQRRNFLHPDTAAVAPIQAPTP 911
            ||...|:|:::..|..|       :::|.:|||                     .|:.|.|.|.|
Human   386 SSSHRALEKQIDTLAGK-------LDALTELLS---------------------TALGPRQLPEP 422

  Fly   912  911
            Human   423  422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SKNP_001284887.1 SK_channel 472..582 CDD:281522 51/111 (46%)
Ion_trans_2 669..748 CDD:285168 36/78 (46%)
CaMBD 762..834 CDD:280961 33/71 (46%)
KCNN4NP_002241.1 SK_channel 15..122 CDD:397547 50/109 (46%)
Ion_trans_2 <237..290 CDD:400301 30/52 (58%)
Calmodulin-binding 286..347 37/63 (59%)
CaMBD 304..376 CDD:198121 34/74 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149388
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265878at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10153
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.950

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