Sequence 1: | NP_572217.1 | Gene: | XRCC1 / 31451 | FlyBaseID: | FBgn0026751 | Length: | 614 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948767.1 | Gene: | Xrcc1 / 84495 | RGDID: | 619823 | Length: | 639 | Species: | Rattus norvegicus |
Alignment Length: | 621 | Identity: | 179/621 - (28%) |
---|---|---|---|
Similarity: | 264/621 - (42%) | Gaps: | 215/621 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 EFEEPQQITGIDIGNEHAAFIEVLV--SRTGCQA--DDFRELLLSSSFMTPIESKNSSNPNRVRC 108
Fly 109 FSSTSLAESALPEKWKLLQIVCTQPFNRHVPYGLSFVKVHVVAAAAPKVKSLVPQ--GVMQFGTF 171
Fly 172 KLREES-------PDSETDNQVNRFHSWKKQTQHKSPAISATSTAAAIRDAGSTALRRLSAGKVS 229
Fly 230 SLAASPKTSTSPSPVLNALRSVSPTPLDAKPLDRNRASLLFGDDDEDVKDAEVNAKKQRLSKHLE 294
Fly 295 ADKDRRRLEQEKERESRKKKSSRHSLDKSISKEDKPPAKEHNSSSREKSTAKEEKEQLRKEERSH 359
Fly 360 SKEEKSRRKEKSKHDHRSSDTSNSKESSRPTAQKRHSSP-------TAVAVTPAKKQKIVDTAIQ 417
Fly 418 YRP----------------LNQLLKGVVLVISGIQNPDRADLRSKAVALGAKYKADWGSGCTHLI 466
Fly 467 CAFKNTPKYNQVKG-KGKIVTRSWIEKCYELKKYLPWRRYAL--------DTNDIGQPESDEELC 522
Fly 523 DEATR-PRR------------DSSKDDVAMLEDSKLTALADQNDVEMNPDALSGI--------DT 566
Fly 567 EDELQRVAEENKTKKAKLRTTVKTKSQDIYEVSTDE 602 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
XRCC1 | NP_572217.1 | XRCC1_N | 1..144 | CDD:280080 | 46/99 (46%) |
BRCT | 420..494 | CDD:278934 | 43/90 (48%) | ||
Xrcc1 | XP_038948767.1 | XRCC1_N | <57..160 | CDD:396415 | 49/102 (48%) |
PHA03247 | <237..359 | CDD:223021 | 48/225 (21%) | ||
BRCT_XRCC1_rpt1 | 330..398 | CDD:349357 | 40/67 (60%) | ||
TFIIF_alpha | <414..>540 | CDD:310411 | 31/122 (25%) | ||
BRCT_XRCC1_rpt2 | 544..637 | CDD:349340 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166340860 | |
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4817 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3226 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG52684 | |
OrthoDB | 1 | 1.010 | - | - | D248725at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007184 | |
OrthoInspector | 1 | 1.000 | - | - | oto97192 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106425 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11370 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X6063 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.810 |