DRSC/TRiP Functional Genomics Resources

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Protein Alignment HMBS and Hmbs

DIOPT Version :10

Sequence 1:NP_000181.2 Gene:HMBS / 3145 HGNCID:4982 Length:361 Species:Homo sapiens
Sequence 2:NP_612103.1 Gene:Hmbs / 46140 FlyBaseID:FBgn0010786 Length:652 Species:Drosophila melanogaster


Alignment Length:330 Identity:166/330 - (50%)
Similarity:210/330 - (63%) Gaps:24/330 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    15 SPKMRVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTK 79
            |.:.:|||||:|||:||.|||..|:..|:..||..:|||..|||.||::|:.:|.|||||||||:
  Fly     2 SAQEKVIRVGSRKSELALIQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKSLFTR 66

Human    80 ELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVG 144
            :||.||....||.||||||||||.||.|..|||:.:||:..||:|....|.|.|:.:||:.||:|
  Fly    67 DLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTIASLPKGSVIG 131

Human   145 TSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLD-EQQEFSAIILATAGLQRMGWHNRVGQILHP 208
            ||||||.||::|.:|||....|||||||||.||| ...:||.||||.|||.||||.:|:.|:|.|
  Fly   132 TSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEP 196

Human   209 EECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMK- 272
            .:.:||||||||.||.||.|..:|.::..|....|..|.:|||:||:.|.||||.||||.:.:| 
  Fly   197 TDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKG 261

Human   273 ---DGQ-----LYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITARNIPRGPQL 329
               :|.     |.|||.||||||:..|:..:..     |.:|...|.|.:         .||.|.
  Fly   262 EPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLAC-----ALNEQKLEGDQR---------KRGAQE 312

Human   330 AAQNL 334
            |...|
  Fly   313 ATSQL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HMBSNP_000181.2 PBP2_HuPBGD_like 20..299 CDD:270363 156/288 (54%)
HmbsNP_612103.1 PBP2_HuPBGD_like 7..296 CDD:270363 156/293 (53%)

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