DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and yifB

DIOPT Version :10

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_418214.2 Gene:yifB / 948282 ECOCYCID:EG11260 Length:506 Species:Escherichia coli


Alignment Length:368 Identity:72/368 - (19%)
Similarity:132/368 - (35%) Gaps:96/368 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 VPSGAAYPTK-----------DEDGNLLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVC 218
            :.||..||.|           .::|...:....:::....:.||..::.|....|:|        
E. coli    54 INSGYEYPAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGEL-------- 110

  Fly   219 DDDLVDRCKPGDRVQIVGSYRCLPGKRGGYT----SGTFRTVLLA----NNISLLSKESNLDISR 275
                          .:.|:.|.:||.....|    ||  |.:::|    :.:.|::.|..| |:.
E. coli   111 --------------ALTGALRGVPGAISSATEAIKSG--RKIIVAKDNEDEVGLINGEGCL-IAD 158

  Fly   276 EDIMLCKKLAKNNDI-----FELLSKSL---APSIHGHAYVKQAILCLLLGGVEKILPNGTRLRG 332
            ....:|..|...:.:     .:.:|::|   ...:.|....|:.:.....||             
E. coli   159 HLQAVCAFLEGKHALERPKPTDAVSRALQHDLSDVIGQEQGKRGLEITAAGG------------- 210

  Fly   333 DINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGV-GLTAAVTTDQETGERRLEA------ 390
             .|:||||.|...|:.|...:....|.........|:.: .|..|.:..::..:|...:      
E. coli   211 -HNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFRSPHHSAS 274

  Fly   391 -------------GAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCS 442
                         |.:.||..||:.:||..:.......|:.|.:|.|::.:|:.....:..||..
E. coli   275 LTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQ 339

  Fly   443 VLAAANP-----VYGRYDQYKTPMENI----GLQDSLLSRFDL 476
            ::||.||     ..|.:::. ||.:.:    .|....|.||||
E. coli   340 LVAAMNPSPTGHYQGNHNRC-TPEQTLRYLNRLSGPFLDRFDL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 13..101 CDD:464206
MCM 106..648 CDD:214631 72/368 (20%)
yifBNP_418214.2 PRK09862 1..506 CDD:182120 72/368 (20%)
Blue background indicates that the domain is not in the aligned region.

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