DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm3 and MCM6

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_011314.2 Gene:MCM6 / 852673 SGDID:S000003169 Length:1017 Species:Saccharomyces cerevisiae


Alignment Length:930 Identity:256/930 - (27%)
Similarity:397/930 - (42%) Gaps:259/930 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQFIKDIQREYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLK-RKNPQRALGLLSNAADE 69
            |||::|..   |...|..|.:.:|...::.|.......:.::...|. |:|     |.|:.|..|
Yeast   116 EQFLEDFS---VQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSMREN-----GALAMAISE 172

  Fly    70 Q----LAF-----GRALKEYA------------STVDPGYAKMHEDLFVGFEG------------ 101
            |    |.|     .|.:::||            |..|.|.|...|.......|            
Yeast   173 QYYRFLPFLQKGLRRVVRKYAPELLNTSDSLKRSEGDEGQADEDEQQDDDMNGSSLPRDSGSSAA 237

  Fly   102 ------CFGNRHVTP------------------------RSLTSIYLGNMVCVEGIVTKVSLIRP 136
                  ....|.:|.                        |.:.|..:|:::.:.|.||:.|.:||
Yeast   238 PGNGTSAMATRSITTSTSPEQTERVFQISFFNLPTVHRIRDIRSEKIGSLLSISGTVTRTSEVRP 302

  Fly   137 KVVRSVHYCPNTRKVMER-----KYTDLTSFEAVPSGAAYPTKDEDGNLLETEYGLSVYKDHQTL 196
            ::.::...|...|.:::.     |||:.| |...||       .|:..........|.:.|.|.:
Yeast   303 ELYKASFTCDMCRAIVDNVEQSFKYTEPT-FCPNPS-------CENRAFWTLNVTRSRFLDWQKV 359

  Fly   197 TIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVG--------SYRCLPG--------KR 245
            .|||...:.|.|.:||::|::...|.|:|.|||||.:..|        :...|||        .|
Yeast   360 RIQENANEIPTGSMPRTLDVILRGDSVERAKPGDRCKFTGVEIVVPDVTQLGLPGVKPSSTLDTR 424

  Fly   246 G------GYTSG------------TFRTVLLA-------NNISLLSKESNLD------------- 272
            |      |..||            |::...||       :||...|.::|.:             
Yeast   425 GISKTTEGLNSGVTGLRSLGVRDLTYKISFLACHVISIGSNIGASSPDANSNNRETELQMAANLQ 489

  Fly   273 ------------------ISREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGG 319
                              :|.::|...|::.|:..|::.|.:|:||::.||..||:.||..:|||
Yeast   490 ANNVYQDNERDQEVFLNSLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGG 554

  Fly   320 VEKILPNGTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETG 384
            |.|....|.:||||||:.::||||.:|||.|:||:..|||::.|:|:.||..||||||..|:|.|
Yeast   555 VHKSTVEGIKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEGG 619

  Fly   385 ERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANP 449
            :..:||||::|||.|:.||||||||...|:.||||.|||..::|:||||||:||||.|:||||||
Yeast   620 DYTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAANP 684

  Fly   450 VYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLS 514
            |.|||::..:...|:.:...::|||||.||:||..:..:|..::.|:|.:|.             
Yeast   685 VGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDLHM------------- 736

  Fly   515 MGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQ 579
                             |:|..:                |...|.|.:|:||..|:..||.|.::
Yeast   737 -----------------KRDEAI----------------EPPFSAEQLRRYIKYARTFKPILTKE 768

  Fly   580 ACEAIANEYSRLRSQEAVETDVARTQ-PITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELV 643
            |...:..:|..||..:|  ...:|:. .||.|.||::||||.|.|||.....:|......|.:|:
Yeast   769 ARSYLVEKYKELRKDDA--QGFSRSSYRITVRQLESMIRLSEAIARANCVDEITPSFIAEAYDLL 831

  Fly   644 QFAYFKKVLDKDRPSKRRRNSGSDAEDDNGEASSQRSPSRRSKRTRTATVGADSDEED------- 701
            :.:..:..:|         :...|.|.||.|:.|.            |..|.:.|.:|       
Yeast   832 RQSIIRVDVD---------DVEMDEEFDNIESQSH------------AASGNNDDNDDGTGSGVI 875

  Fly   702 -IEPPQPDAGDLTRRETRRSLPARSVAMLMASPSSEEQSVATSTTEPAIISDARLGEFKNNLQRL 765
             .|||    .|:...::..:          |.|.:.|:...|.|.:          ::.:.:..:
Yeast   876 TSEPP----ADIEEGQSEAT----------ARPGTSEKKKTTVTYD----------KYVSMMNMI 916

  Fly   766 FREAREQSLALARITTAINV 785
            .|:..|.....|...||:::
Yeast   917 VRKIAEVDREGAEELTAVDI 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 22/104 (21%)
MCM 106..648 CDD:214631 203/643 (32%)
MCM6NP_011314.2 MCM_N 112..205 CDD:405270 22/96 (23%)
MCM 272..836 CDD:214631 201/619 (32%)
MCM6_C 900..1007 CDD:408078 7/47 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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