DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and MCM5

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_013376.1 Gene:MCM5 / 850980 SGDID:S000004264 Length:775 Species:Saccharomyces cerevisiae


Alignment Length:707 Identity:234/707 - (33%)
Similarity:349/707 - (49%) Gaps:110/707 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EGEQFIKDIQREYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAAD 68
            :..:.||..:...::|..|  .|.||...:::.|..|:..|.||:..|...|......|....:|
Yeast    23 DNTEIIKSFKNFILEFRLD--SQFIYRDQLRNNILVKNYSLTVNMEHLIGYNEDIYKKLSDEPSD 85

  Fly    69 EQLAFGRALKEYASTV--------------DPGYAKMHED-LFVGFEGCF-----GNRHVTP-RS 112
            ....|..|:.:.|..:              ||....|..| |.:.....|     .|.:..| |.
Yeast    86 IIPLFETAITQVAKRISILSRAQSANNNDKDPENTSMDTDSLLLNSLPTFQLILNSNANQIPLRD 150

  Fly   113 LTSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFE----AVPSGAAYPT 173
            |.|.::..:|.:.||:...|::..:.......|.|.|........:..|..    ::|.......
Yeast   151 LDSEHVSKIVRLSGIIISTSVLSSRATYLSIMCRNCRHTTSITINNFNSITGNTVSLPRSCLSTI 215

  Fly   174 KDEDGNLLETEYG------------------LSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDD 220
            :.|.....|:..|                  .|.:.|.|.|.:||:||..|.|::||::.:.||.
Yeast   216 ESESSMANESNIGDESTKKNCGPDPYIIIHESSKFIDQQFLKLQEIPELVPVGEMPRNLTMTCDR 280

  Fly   221 DLVDRCKPGDRVQIVGSYRCLPGKRG------GYTSGTFRTVLLANNISLLSKESNLDIS----- 274
            .|.::..||.||.|||.|.....|.|      |..:|.....:....|.:|..:|:::.|     
Yeast   281 YLTNKVIPGTRVTIVGIYSIYNSKNGAGSGRSGGGNGGSGVAIRTPYIKILGIQSDVETSSIWNS 345

  Fly   275 -------REDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRG 332
                   .|:..|  :|::|..::|:|:.|:||||.|:..:|:||:|||:||.:||||:|.||||
Yeast   346 VTMFTEEEEEEFL--QLSRNPKLYEILTNSIAPSIFGNEDIKKAIVCLLMGGSKKILPDGMRLRG 408

  Fly   333 DINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLAD 397
            ||||||:|||..||||||::|...:|.|:.|:|:|||..||||:|..|..|.|..||.|||||||
Yeast   409 DINVLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKGSSAAGLTASVQRDPMTREFYLEGGAMVLAD 473

  Fly   398 RGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPME 462
            .|||||||||||.|.||.||||.|||..::|:||||...||:|.||||||||:|||||..|:|.:
Yeast   474 GGVVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPIYGRYDDLKSPGD 538

  Fly   463 NIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVS 527
            ||..|.::|||||::|::.|..:.:.|..|::||:.:|              .|::.|     :.
Yeast   539 NIDFQTTILSRFDMIFIVKDDHNEERDISIANHVINIH--------------TGNANA-----MQ 584

  Fly   528 SSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIA--KCMKPKLGEQACEAIANEYSR 590
            :.:|:..:|:                    |:|.|::||...  || .|:|..||.|.:::.:..
Yeast   585 NQQEENGSEI--------------------SIEKMKRYITYCRLKC-APRLSPQAAEKLSSNFVT 628

  Fly   591 LRSQ---EAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQ 644
            :|.|   ..:|:....:.|||.|.||.:||::.:.|:..:|..........||.|.|
Yeast   629 IRKQLLINELESTERSSIPITIRQLEAIIRITESLAKLELSPIAQERHVDEAIRLFQ 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 22/97 (23%)
MCM 106..648 CDD:214631 208/585 (36%)
MCM5NP_013376.1 MCM_N 29..>101 CDD:405270 18/73 (25%)
MCM 144..689 CDD:214631 208/584 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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