DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and MCM2

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_175112.2 Gene:MCM2 / 841056 AraportID:AT1G44900 Length:936 Species:Arabidopsis thaliana


Alignment Length:663 Identity:234/663 - (35%)
Similarity:355/663 - (53%) Gaps:69/663 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAHEGEQFIKDIQREYVDFL------DDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRA 59
            |..|..:|   |.:::.|||      .:|.....|...:.:|::.....|.::..:....:|..|
plant   210 MRDEVRRF---IAKKFKDFLLTYVKPKNENGDIEYVRLINEMVSANKCSLEIDYKEFIHVHPNIA 271

  Fly    60 LGLLSNAADEQLAFGRALKEYASTV----DPGYAKMHEDLFVGFEGCFGNRHVTPRSLTSIYLGN 120
            :.|    ||........::|.:..|    .|.|..:|..::|.......|..:  |::..|:|..
plant   272 IWL----ADAPQPVLEVMEEVSEKVIFDLHPNYKNIHTKIYVRVTNLPVNDQI--RNIRQIHLNT 330

  Fly   121 MVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVPSGAAYPTKDEDGNLLETEY 185
            |:.:.|:||:.|.:.|::.:..:.|.....|:...:.:  |:..|..|:....:.:....:..|.
plant   331 MIRIGGVVTRRSGVFPQLQQVKYDCNKCGAVLGPFFQN--SYSEVKVGSCSECQSKGPFTVNVEQ 393

  Fly   186 GLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYR-----CLPGKR 245
              ::|:::|.|||||.|...|||:|||..:::..:||:|..:||:.:::.|.|.     .|..|.
plant   394 --TIYRNYQKLTIQESPGTVPAGRLPRHKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKN 456

  Fly   246 GGYTSGTFRTVLLANNISLLSKESNL----DISREDIMLCKKLAKNNDIFELLSKSLAPSIHGHA 306
            |   ...|.||:.||.:   :|:.:|    .:::||....::|:|:..|.|.:.||:||||:||.
plant   457 G---FPVFATVVEANYV---TKKQDLFSAYKLTQEDKTQIEELSKDPRIVERIIKSIAPSIYGHE 515

  Fly   307 YVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGV 371
            .:|.|:...:.||.||.:....||||||||||:|||..||||.|:||..|..||:.|||:|:|.|
plant   516 DIKTALALAMFGGQEKNIKGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAV 580

  Fly   372 GLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHAS 436
            ||||||..|..|.|..||.||:||||||:..|||||||:|.||.:|||.|||..::||||||..|
plant   581 GLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTS 645

  Fly   437 LNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHR 501
            |.|||||:||||||.||||..|:..:|:.|.|.:|||||:|.|:.||:|...|:|:::.||..|.
plant   646 LQARCSVIAAANPVGGRYDSSKSFAQNVELTDPILSRFDILCVVKDVVDPVTDEMLAEFVVNSHF 710

  Fly   502 YRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYI 566
            ...||         |....||           |.|     |. :.|.|.....::|....::||:
plant   711 KSQPK---------GGKMEDS-----------DPE-----DG-IQGSSGSTDPEVLPQNLLKKYL 749

  Fly   567 HIAKC-MKPKLGEQACEAIANEYSRLRSQEAVETDVARTQPITARTLETLIRLSTAHARARMSKS 630
            ..:|. :.|||||...:.:...|:.||.:......|:    |..|.||::||:|.||||..:.:.
plant   750 TYSKLYVFPKLGELDAKKLETVYANLRRESMNGQGVS----IATRHLESMIRMSEAHARMHLRQY 810

  Fly   631 VTIDDAHAAIELV 643
            ||.:|.:.||.::
plant   811 VTEEDVNMAIRVL 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 18/92 (20%)
MCM 106..648 CDD:214631 211/548 (39%)
MCM2NP_175112.2 MCM2_N 67..>138 CDD:372227
MCM_N 222..313 CDD:379644 18/94 (19%)
MCM 320..828 CDD:214631 211/546 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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