DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and MCM6

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001331629.1 Gene:MCM6 / 834492 AraportID:AT5G44635 Length:857 Species:Arabidopsis thaliana


Alignment Length:847 Identity:248/847 - (29%)
Similarity:392/847 - (46%) Gaps:192/847 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQFIKDIQREYVDF-----LDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNP--QRALGLL 63
            ||.|: ::..:::|     ||..:.:..|...::.:...:|..:.::.:.:...|.  |:|:   
plant    11 EQAIQ-VENVFLEFLKSFRLDANKPELYYEAEIEAIRGGESTMMYIDFSHVMGFNDALQKAI--- 71

  Fly    64 SNAADEQLAF----GRALKEYASTVDPGYAK---MHEDLFVGFEGCFGNRHVTPRSLTSIYLGNM 121
               |||.|.|    ..|.|.:...::|.:..   .::|:.|.|......:.:  |.||:..:|.:
plant    72 ---ADEYLRFEPYLRNACKRFVIEMNPSFISDDTPNKDINVSFYNLPFTKRL--RELTTAEIGKL 131

  Fly   122 VCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMER-----KYTDLTSFEAVPSGAAYPT--KDEDGN 179
            |.|.|:||:.|.:||:::.....|.:...|::.     |||.       |:....||  ......
plant   132 VSVTGVVTRTSEVRPELLYGTFKCLDCGSVIKNVEQQFKYTQ-------PTICVSPTCLNRARWA 189

  Fly   180 LLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVG-------- 236
            ||..|   |.:.|.|.:.:||..::.|||.||||:|::...::|::.:.||.|...|        
plant   190 LLRQE---SKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPDI 251

  Fly   237 SYRCLPGKRG----------GYTSG---------------TFRTVLLANNISLLSKESNLDI--- 273
            |....||:|.          ..|:|               ::|...:||::.:.....|.|:   
plant   252 SALAAPGERAECRRDSSQQKSSTAGHEGVQGLKALGVRDLSYRLAFIANSVQIADGSRNTDMRNR 316

  Fly   274 ------------SREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPN 326
                        :.|::...:::....|.|..|..|:||::.||..:|:|:|.:|||||.|....
plant   317 QNDSNEDDQQQFTAEELDEIQQMRNTPDYFNKLVGSMAPTVFGHQDIKRAVLLMLLGGVHKTTHE 381

  Fly   327 GTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAG 391
            |..|||||||.::||||.||||.|:|.....||::.|:|:.||..||||.|..:.||||..:|||
plant   382 GINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAG 446

  Fly   392 AMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQ 456
            |::|||.|:.||||||||...|:.||||.|||..::|:||||.|:||||.|:|||||||.||||:
plant   447 ALMLADNGICCIDEFDKMDIKDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPVGGRYDK 511

  Fly   457 YKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYAD 521
            .|....|:.|..::||||||::||:|..|...|..|:.|:||:|                     
plant   512 SKPLKYNVNLPPAILSRFDLVYVMIDDPDEVTDYHIAHHIVRVH--------------------- 555

  Fly   522 SLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEF----MRKYIHIAKCMKPKLGEQACE 582
                                         |:||..||.||    :::||..||.:||||..:|.:
plant   556 -----------------------------QKHEAALSPEFTTVQLKRYIAYAKTLKPKLSPEARK 591

  Fly   583 AIANEYSRLRSQEAVE-TDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHA--AIELVQ 644
            .:...|..||..:... |.||  ..:|.|.||.|||||.|.||:.:  .:.:..:|.  |:.|::
plant   592 LLVESYVALRRGDTTPGTRVA--YRMTVRQLEALIRLSEAIARSHL--EILVKPSHVLLAVRLLK 652

  Fly   645 FAYFKKVLDKDRPSKRRRNSG----SDAEDDNGEASSQRSPSRRSKRTRTATVGADSDEEDIEPP 705
            .:....            .||    |:.:|.||:..                    .|.:|||.|
plant   653 TSVISV------------ESGDIDLSEYQDANGDNM--------------------DDTDDIENP 685

  Fly   706 QPDAGDLTRRETRRSLPARSVAMLMASPSSEEQSVATSTTEPAIISDARLGEFKNNLQRLFREAR 770
            .....|   ::...:.||.:.    |...:..|.:..|..|...|:.|.:...:.:.:.:.::::
plant   686 VDGEED---QQNGAAEPASAT----ADNGAAAQKLVISEEEYDRITQALVIRLRQHEETVNKDSK 743

  Fly   771 EQ 772
            :|
plant   744 QQ 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 19/96 (20%)
MCM 106..648 CDD:214631 205/603 (34%)
MCM6NP_001331629.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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