DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and MCM9

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001318221.1 Gene:MCM9 / 815890 AraportID:AT2G14050 Length:651 Species:Arabidopsis thaliana


Alignment Length:735 Identity:206/735 - (28%)
Similarity:313/735 - (42%) Gaps:200/735 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EYVDFLDDE------------------EDQGIYA-----GHVKDMIAEK---SKRLI-VNVNDLK 52
            ||.:.:||.                  :|..|.|     .|:| ...||   .||.| |.:|  .
plant    44 EYAELVDDNPSLARQVFSDPEHYLRQFDDSAILAHKIALEHMK-KFEEKIGIEKRFIHVRIN--T 105

  Fly    53 RKNPQRALGLLSNAADEQLAFGRALKEY--------ASTVDPGYAKMHEDLFVGFEG-----CFG 104
            ..:|      |..:.:...:.||...::        .:.:..|..||       :||     |..
plant   106 SGSP------LERSPETFPSIGRVRVKHRGILMMLKGTVIRSGAVKM-------YEGEKMYRCRK 157

  Fly   105 NRHVTP--RSLTSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVPS 167
            .:|:.|  ..|.||.              |:::|.      :||:.|.    |..:.|:|:.|  
plant   158 CKHMFPIFPELESIN--------------SIVKPP------FCPSQRS----KACEGTNFDPV-- 196

  Fly   168 GAAYPTKDEDGNLLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRV 232
                     |..:..        .|:|.:.|||..:....|.:|||:.:|..|||||..|.||.|
plant   197 ---------DDTVTR--------HDYQEIKIQENTQVLGVGVIPRSILVVLKDDLVDNVKAGDDV 244

  Fly   233 QIVG-----------SYRCLPGKRGGYTSGTFRTVLLANNISLLSK-ESNLDISREDIMLCKK-- 283
            .:.|           ..||           ....:|:||::...:: :|.:|||.:.|...|.  
plant   245 VVSGILTSKWSHDLKDVRC-----------DLEPMLIANHVRRTNELKSEIDISDDLIEKFKNFW 298

  Fly   284 -------LAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGD 341
                   |...|.|.    :.:.|.:.|...||.|:...|:|||:.:..:||::||:.::|||||
plant   299 SHFRDTPLKGRNAIL----RGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLIGD 359

  Fly   342 PSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEF 406
            |...|||.|::....:.||:.|||.||:..|||  ||..::.||..|||||:||||.|:.|||||
plant   360 PGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLT--VTAVKDGGEWMLEAGALVLADGGLCCIDEF 422

  Fly   407 DKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLL 471
            |.|.:.||..|||.|||..::::|||:..:|:.:..|..|.|| .|:||..::...|..|...||
plant   423 DSMREHDRATIHEAMEQQSISVAKAGLVTTLSTKTIVFGATNP-KGQYDPDQSLSVNTALSGPLL 486

  Fly   472 SRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADG----EPLSMGSSYADSLSFVSSSEEK 532
            ||||::.|:||..:.:.|.::|.|::...:....:|.|.    .||.|                 
plant   487 SRFDIVLVLLDTKNPEWDAVVSSHILAEVQIEQDREVDDLTTIWPLPM----------------- 534

  Fly   533 KDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIH-IAKCMKPKLGEQACEAIANEYSRLRSQEA 596
                                         :::||. :.|..:|.|.::| |.|.:.|.||:.:.:
plant   535 -----------------------------LQRYIQFVKKNFRPVLSKEA-EEIISSYYRLQRRSS 569

  Fly   597 VETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAY-FKKVLDKDRPSKR 660
            .. :.|||   |.|.||:||||:.||||......||..||..||..::.:. ...::|.   ...
plant   570 TH-NAART---TVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIESSMTISAIVDS---MGN 627

  Fly   661 RRNSGSDAEDDNGEASSQRS 680
            ..:|....|.|...|..:||
plant   628 ALHSNFSEEPDQEYAKQERS 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 21/117 (18%)
MCM 106..648 CDD:214631 173/570 (30%)
MCM9NP_001318221.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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