DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and MCM5

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_178812.1 Gene:MCM5 / 815415 AraportID:AT2G07690 Length:727 Species:Arabidopsis thaliana


Alignment Length:779 Identity:252/779 - (32%)
Similarity:367/779 - (47%) Gaps:131/779 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 REYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLK----------RKNPQRALGLLSNAAD 68
            :|::...:.|::...|    ::.:.:..|||:|::.||.          |..|...|.:...||.
plant    36 KEFIRNFEIEQNCFPY----REALLDNPKRLVVHLEDLLSFDSDLPSLIRSAPADYLPVFEKAAG 96

  Fly    69 EQLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRH--VTPRSLTSIYLGNMVCVEGIVTKV 131
            |.|. |..::|    .:.| ..|.|.|....:....:|.  |:.|.|.:.|:..:|.:.||....
plant    97 EVLT-GLKMRE----ANEG-GVMEEPLTRDVQILLTSREDPVSMRLLGAQYISKLVKISGISIAA 155

  Fly   132 SLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVP-----SGAAYPTKDE------------DGN 179
            |.::.|.......|.|.:|..|           ||     .||..|...:            |..
plant   156 SRVKAKATYVFLVCKNCKKTRE-----------VPCRPGLGGAIVPRSCDNIPQPGEEPCPLDPW 209

  Fly   180 LLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYRCLPGK 244
            ::..:  .|.|.|.|||.:||.||..|.|:|||::.:..|..||....||.|:.::|.|......
plant   210 MVVPD--RSQYVDQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTVMGIYSIFQAS 272

  Fly   245 RGGYT-SGT-------FRTVLLANNISLLSK-ESNLDISREDIMLCKKLAKNNDIFELLSKSLAP 300
            ....: .|.       .|.|.|.:.....|: .:|.....|:..  ||.|.:.|:::.:...:||
plant   273 SSSNSHKGAVAIRQPYIRVVGLEDTNEASSRGPANFTPDEEEEF--KKFADSQDVYKNICTKIAP 335

  Fly   301 SIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTG 365
            ||.||..||:|..|||.||..|.||:|.:|||||||||:||||.||||.|::|..|||.|:.|:|
plant   336 SIFGHEDVKRAAACLLFGGSRKSLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSG 400

  Fly   366 RGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISK 430
            :|||..||||:|..|..|.|..||.|||||||.|||||||||||...||.||||.|||..::|:|
plant   401 KGSSAAGLTASVIRDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAK 465

  Fly   431 AGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDH 495
            |||...||:|.||||||||..||||..||..:||.||.::||||||:|::.|:.....|:.|:.|
plant   466 AGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRKYSQDKEIASH 530

  Fly   496 VVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVE 560
            ::|:|...|             .::|     .:::.|:|                         .
plant   531 IIRVHASAN-------------KFSD-----ENTDSKED-------------------------N 552

  Fly   561 FMRKYIHI--AKCMKPKLGEQACEAIANEYSRLR---SQEAVETDVARTQPITARTLETLIRLST 620
            ::::||..  |:| .|:|.:.|.|.:..:|..:|   .:.|.||..|...|||.|.||.::|||.
plant   553 WLKRYIQYCRARC-HPRLSKDAAENLQRKYVTIRMDMKRRAHETGEAAPIPITVRQLEAIVRLSE 616

  Fly   621 AHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDAE-DDNGEASSQRSPSRR 684
            :.|:.|:|...|.||...|.:|    :....:|..|       ||.:.: :..||.:::...:..
plant   617 SLAKMRLSHEATPDDVDKAFKL----FDTSTMDAAR-------SGINQQINITGEMANEIKQAET 670

  Fly   685 SKRTRTATVGADSDEEDIEPPQPDAGDLTRRETRRSLPARSVAMLMASPSSEEQSVATSTTEPA 748
            ..:.|.......|:...||       ||.|.....|:..|::.::......|.|....|....|
plant   671 QIKRRMGIGARLSERRLIE-------DLARMGMNDSMVRRALLIMHQRGEVEYQRERRSIVRKA 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 21/92 (23%)
MCM 106..648 CDD:214631 211/574 (37%)
MCM5NP_178812.1 MCM_N 35..127 CDD:379644 22/100 (22%)
MCM 131..644 CDD:214631 210/575 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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