DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and mcm8

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001072344.1 Gene:mcm8 / 779797 XenbaseID:XB-GENE-961372 Length:843 Species:Xenopus tropicalis


Alignment Length:727 Identity:212/727 - (29%)
Similarity:353/727 - (48%) Gaps:102/727 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FIKDIQREYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAADEQLA 72
            |.|.|  |..| .|:.|.:|......||::.::.....:.::...::.|::.|..:..|..:.|.
 Frog    95 FTKQI--ELYD-KDEIERKGSILVDYKDLLQDEDLSASIPMSSELKEMPEKILECMGLAIHQVLT 156

  Fly    73 FGRALKEYASTVDPGYAKMHEDLFVGFEG-----------------CFGNRHVTP-RSLTSIYLG 119
              :.|:.:|       |::.|.     ||                 .|....:|| ::|.:...|
 Frog   157 --KDLERHA-------AELQEQ-----EGLRTEEAPIVNVPFIHARVFNYDPLTPLKNLRASLYG 207

  Fly   120 NMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFE------AVPSGAAYPTKDEDG 178
            ..|.:.|.|.:||.|:|..|:....|        ....|:.||.      |||:....|......
 Frog   208 KYVALRGTVVRVSNIKPLCVKMAFSC--------NMCGDIQSFPFPDGKYAVPTKCPVPECRGRS 264

  Fly   179 NLLETEYGLSVYKDHQTLTIQEM--PEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYRCL 241
            ........|:|..|.||:.:||:  .::..||::||:|:.....||||.|.|||.|.:.|..:..
 Frog   265 FTANRSSPLTVTVDWQTIKVQELMSDDQREAGRIPRTVECELIQDLVDSCVPGDMVTVTGIVKVS 329

  Fly   242 PGKRGGYTSGTFRTVLL----ANNIS------------LLSKESNLDISREDIMLCKKLAKNNDI 290
            ..:.||:.:...:.:.|    ||::|            ..|..:::|.|.:|:...:::....::
 Frog   330 NTRDGGFKNKNNKCMFLLYIEANSVSNSKGHKIKSTDDSESHGASMDFSLKDLYAIQEIQAQENL 394

  Fly   291 FELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTR--LRGDINVLLIGDPSVAKSQLLRYV 353
            |:|:..||.|:|:||..||..:...|.||.:|...:..|  :|||.::|::|||.:.|||:|:.|
 Frog   395 FQLIVNSLCPTIYGHELVKAGLSLALFGGCQKYADDKNRIPIRGDPHILVVGDPGLGKSQMLQAV 459

  Fly   354 LNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIH 418
            .|.|||.:...|..::..|||..::.|..||:..|||||::|.|:|:..|||||||.: ...|:.
 Frog   460 CNVAPRGVYVCGNTTTTSGLTVTLSRDSATGDFGLEAGALILGDQGICGIDEFDKMGN-QHQALL 523

  Fly   419 EVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDV 483
            |.|||..::::||||..||.||.|::||||||.|.|::.||..||:.:..:|||||||:|::||.
 Frog   524 EAMEQQSISLAKAGIVCSLPARTSIIAAANPVGGHYNKGKTVSENLKMGSALLSRFDLVFILLDT 588

  Fly   484 IDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVY-----EKYDA 543
            .:.|.|.::|:||:.|.  ...||.....|:..::...:.|.:....|:...|..     |.:|.
 Frog   589 PNEDHDHLLSEHVMAMR--AGAKEMQSADLTCPTTQNSNTSVLEEPSERPLGERLKLRPGEHFDP 651

  Fly   544 LLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRSQ-EAVETDVARTQPI 607
            :.|...|:      .|.:.|:|:|      |.|...|.:.:.:.|..||.| :.::     :.||
 Frog   652 IPHQLLRK------YVGYARQYVH------PTLSPDAAQVLQDFYLELRKQNQGID-----STPI 699

  Fly   608 TARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDAEDDN 672
            |.|.||:||||:.|.||..:.:..|.|||...:::::::......|:.......|:       .:
 Frog   700 TTRQLESLIRLTEARARLELREKATKDDAEEVVQIMKYSLLGTFSDEFGKLDFHRS-------QH 757

  Fly   673 GEASSQRSPSRR 684
            |...|.||.:::
 Frog   758 GSGMSNRSKAKK 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 14/82 (17%)
MCM 106..648 CDD:214631 185/574 (32%)
mcm8NP_001072344.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
Mcm2 93..769 CDD:224162 212/725 (29%)
MCM8 397..738 CDD:350665 132/360 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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