DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm3 and zmcm3

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001039231.1 Gene:zmcm3 / 734092 XenbaseID:XB-GENE-971646 Length:809 Species:Xenopus tropicalis


Alignment Length:824 Identity:518/824 - (62%)
Similarity:637/824 - (77%) Gaps:35/824 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQFIKDIQREYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAADEQ 70
            :|.:::.||||:||||||||||||...|:|||:|...|||||||||::||.:||..|::||.:..
 Frog    11 DQEMREAQREYLDFLDDEEDQGIYQSKVRDMISENQYRLIVNVNDLRKKNEKRANMLMNNAFEGL 75

  Fly    71 LAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTPRSLTSIYLGNMVCVEGIVTKVSLIR 135
            :||.||||::.:::|..|||.:|:.::|.||.|||:|||||:|||..|..:|||||||||.||:|
 Frog    76 IAFQRALKDFVASIDGTYAKQYEEFYIGLEGSFGNKHVTPRTLTSRCLSCIVCVEGIVTKCSLVR 140

  Fly   136 PKVVRSVHYCPNTRKVMERKYTDLTSFEAVPSGAAYPTKDEDGNLLETEYGLSVYKDHQTLTIQE 200
            |||||||||||.|:|.:|||||||||.||.||.|.||||||:.|.||||||||:||||||:||||
 Frog   141 PKVVRSVHYCPATKKTIERKYTDLTSLEAFPSSAVYPTKDEENNPLETEYGLSIYKDHQTITIQE 205

  Fly   201 MPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYRCLPGKRGGYTSGTFRTVLLANNISLL 265
            ||||||||||||||||:.||||||:.|||||||::|:|||||.|:.||||.:|||:|:|.|:..:
 Frog   206 MPEKAPAGQLPRSVDIILDDDLVDKVKPGDRVQVIGTYRCLPSKQNGYTSASFRTILIACNVIQM 270

  Fly   266 SKESNLDISREDIMLCKKLAKNN--DIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGT 328
            |||.....|.:|:...||.:|::  ||||.||:|||||||||.|:|:||||:|||||||:|.|||
 Frog   271 SKEVTPVFSADDLAKIKKFSKSHSKDIFEQLSRSLAPSIHGHLYIKKAILCMLLGGVEKVLDNGT 335

  Fly   329 RLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAM 393
            |:||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
 Frog   336 RIRGDINVLLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAM 400

  Fly   394 VLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYK 458
            ||||||||||||||||||:||||||||||||||||:||||||.||||||||||||||||||||||
 Frog   401 VLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYK 465

  Fly   459 TPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSL 523
            |||:||||||||||||||||:|||.:|.:.|:.|||||:||||||...|.||:.:.:||: .|.|
 Frog   466 TPMDNIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRYRAAGEQDGDAMPLGSA-VDIL 529

  Fly   524 SFVS---SSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIA 585
            :...   :|||:::.:||||:|:|||| .::|.||||||||||||:|:||..||.|.::|...||
 Frog   530 ATNDPNVTSEEQQELQVYEKHDSLLHG-VKKRKEKILSVEFMRKYVHVAKIFKPVLTQEAASFIA 593

  Fly   586 NEYSRLRSQEAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKK 650
            .||||||:|:.:.||||||.|:||||||||||||||||:.||||:|.:.||.|||||||:|||||
 Frog   594 EEYSRLRNQDQLSTDVARTSPVTARTLETLIRLSTAHAKVRMSKTVQLQDAEAAIELVQYAYFKK 658

  Fly   651 VLDKDRPSKRRRNSGSDAEDD-----NGEASSQRSPSRRSKRTRTATVGADSDEEDIEPPQPDAG 710
            ||:|:: .:|||:..||.|.:     :|||..:|. .||::...:......||.||..|      
 Frog   659 VLEKEK-KRRRRDEDSDTEGEQQTQPDGEAKKRRK-KRRAQEGESHDPYEFSDTEDETP------ 715

  Fly   711 DLTRRETRRSLPARSVAMLMASPSSEEQSVATSTTEPAIISDARLGEFKNNLQRLFREAREQSLA 775
                           |.....:|.:.::.:.|.::....:|..||..||:.|...|:.|..||:|
 Frog   716 ---------------VVHTPKTPVNGQEEMETDSSAKPGLSGERLKAFKSALLGAFKSAHAQSIA 765

  Fly   776 LARITTAINVGSQEPFTAGEIEAAVHRMTEDNQIMVADDIVFLI 819
            :..:..|||..:..||:..|::||:..|.|.|.|||:|:|||||
 Frog   766 MEALMEAINKRNDSPFSQAEVKAALELMEEANHIMVSDNIVFLI 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 45/82 (55%)
MCM 106..648 CDD:214631 405/546 (74%)
zmcm3NP_001039231.1 MCM_N 21..106 CDD:379644 46/84 (55%)
MCM 111..656 CDD:214631 405/546 (74%)
Arginine finger 479..482 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..741 20/99 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 381 1.000 Domainoid score I834
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1791
Inparanoid 1 1.050 987 1.000 Inparanoid score I309
OMA 1 1.010 - - QHG53768
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0004045
OrthoInspector 1 1.000 - - oto104722
Panther 1 1.100 - - LDO PTHR11630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R693
SonicParanoid 1 1.000 - - X2791
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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