DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and Mcm8

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001277983.1 Gene:Mcm8 / 66634 MGIID:1913884 Length:833 Species:Mus musculus


Alignment Length:731 Identity:212/731 - (29%)
Similarity:349/731 - (47%) Gaps:98/731 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FIKDIQ------REYVDFLD-DE-EDQGIYAGHVKDMI-AEKSKRLIVNVNDLKRKNPQRALGLL 63
            ||:.||      ..::|..| || |.:|......|::. |::...||.::.:..|..|::.|..:
Mouse    85 FIEKIQAFEKFFTRHIDLYDKDEIERKGSILVDFKELTKADEITNLIPDIENALRDAPEKTLACM 149

  Fly    64 SNAADEQLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTPR-----------SLTSIY 117
            ..|..:.|.  :.|:.:|:.:     :..|.|..|.|......|:..|           ::.:..
Mouse   150 GLAIHQVLT--KDLERHAAEL-----QAQEGLSNGGETMVNVPHIYARVYNYEPLTHLKNIRATC 207

  Fly   118 LGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVM-----ERKYTDLTSFEAVPS--GAAY-PTK 174
            .|..:.:.|.|.:||.|:|........|....::.     :.||| |.:...||:  |.:: |.:
Mouse   208 YGKYISIRGTVVRVSNIKPLCTNMAFQCAACGEIQSFPLPDGKYT-LPTKCPVPACRGRSFAPLR 271

  Fly   175 DEDGNLLETEYGLSVYKDHQTLTIQEMPEKA--PAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGS 237
            ...         |:|..|.|.:.|||:...|  .||::||:::.....||||.|.|||.|.:.|.
Mouse   272 SSP---------LTVTLDWQLIKIQELMSDAQREAGRIPRTIECELVHDLVDSCVPGDTVTVTGI 327

  Fly   238 YRCLPGKRGGYTSG---TFRTVLLANNIS------LLSKESN------LDISREDIMLCKKLAKN 287
            .:....:.|.....   .|...:.||::|      ..:.|..      ::.|.:|:...:::...
Mouse   328 VKVSNSEEGSRNKNDKCMFLLYIEANSVSNSKGPKAQTAEDGCKHGTLMEFSLKDLYAIREIQAE 392

  Fly   288 NDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTR--LRGDINVLLIGDPSVAKSQLL 350
            .::.:|:..||.|.|.||..||..:...|.||.:|...:..|  :|||.:||::|||.:.|||:|
Mouse   393 ENLLKLVVNSLCPVIFGHELVKAGLTLALFGGSQKYADDKNRIPIRGDPHVLIVGDPGLGKSQML 457

  Fly   351 RYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRT 415
            :...|.|||.:...|..::..|||..::.|..:|:..|||||:||.|:|:..|||||||.: ...
Mouse   458 QAACNVAPRGVYVCGNTTTSSGLTVTLSKDSSSGDFALEAGALVLGDQGICGIDEFDKMGN-QHQ 521

  Fly   416 AIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVM 480
            |:.|.|||..::::|||:..||.||.|::||||||.|.|::.:|..||:.:..:|||||||:|::
Mouse   522 ALLEAMEQQSISLAKAGVVCSLPARTSIIAAANPVGGHYNKARTVSENLKMGSALLSRFDLVFIL 586

  Fly   481 LDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVY-----EK 540
            ||..:...|.::|:||:.: |....|......::...|...:.|.:....||..:|..     |:
Mouse   587 LDTPNEQHDHLLSEHVIAI-RAGKQKAVSSATVTRVLSQDSNTSVLEVVSEKPLSERLKVAPGEQ 650

  Fly   541 YDALLHGKSRQRHEKILSVEFMRKYIHIAK-CMKPKLGEQACEAIANEYSRLRSQEAVETDVART 604
            .|.:.|             :.:||||..|: .:.|:|...|.:|:.:.|..||.|    :....:
Mouse   651 TDPIPH-------------QLLRKYIGYARQYVHPRLSTDAAQALQDFYLELRKQ----SQRVGS 698

  Fly   605 QPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDAE 669
            .|||.|.||:||||:.|.||..:.:..|.:||...||:::.:......|:        ....|.|
Mouse   699 SPITTRQLESLIRLTEARARLELREEATREDAEDIIEIMKHSMLGTYSDE--------FGNLDFE 755

  Fly   670 -DDNGEASSQRSPSRR 684
             ..:|...|.||.::|
Mouse   756 RSQHGSGMSNRSTAKR 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 20/85 (24%)
MCM 106..648 CDD:214631 179/585 (31%)
Mcm8NP_001277983.1 MCM_N 91..216 CDD:291233 24/131 (18%)
Mcm2 132..830 CDD:224162 198/684 (29%)
AAA 428..586 CDD:99707 71/158 (45%)
PEPcase <676..>747 CDD:304407 24/74 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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