DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and mcm9

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001333089.1 Gene:mcm9 / 555610 ZFINID:ZDB-GENE-041014-310 Length:1135 Species:Danio rerio


Alignment Length:861 Identity:228/861 - (26%)
Similarity:353/861 - (40%) Gaps:247/861 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VKDMIAEKSKRL----IVNVNDLKRKN----------PQRALGLLSNAADEQLAFGRALKEYAST 83
            ::.::.|.::.|    :||...|...|          |.:.|.:..||....   .:|:.:.:|:
Zfish    29 IQQILQENTEDLHYPVVVNAMTLFEDNMEVGECFNAFPSKVLPIFDNALQRA---AQAISQSSSS 90

  Fly    84 VDPGYAKMHEDLFVGFEGCFGNRHVTPRSLTSIYL------GNMVCVEGIVTKVSLIRPKVVRSV 142
            ......::..::.|...|.    .|.| .||..::      |:.:.|.|.|     ||..|.:.:
Zfish    91 SPQDTFRLKHNMHVRISGL----PVCP-ELTRDHIPKARDVGHFLSVTGTV-----IRTSVTKVL 145

  Fly   143 HY------------------------------CPNTRKVMERKYTDLTSFEAVPSGAAYPTKDED 177
            .|                              ||:.......|:|.|:..:|.|:..        
Zfish   146 EYERDYMCNKCRHVFSVQASFEQFYTFTPPTSCPSEEGCGSFKFTCLSGSDAPPAAC-------- 202

  Fly   178 GNLLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVG------ 236
                         ||:|.:.|||..:|...|.:|||:.|:.:|||||.||.||.:.:.|      
Zfish   203 -------------KDYQEIKIQEQVQKLSVGSIPRSMLIILEDDLVDSCKSGDDITVYGVVCQRW 254

  Fly   237 -----SYRCLPGKRGGYTSGTFRTVLLANNISLLSKESNLDISREDIMLCKK------------L 284
                 ..||           ....||.||.|.:.:::|...:..|||.  |:            :
Zfish   255 KPMFQDCRC-----------DVEIVLKANYIEVNNEQSTTALVLEDIQ--KEFEEFWDSHKHDPI 306

  Fly   285 AKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPSVAKSQL 349
            |..|:|.    .||.|.:.|...||.|:..:|.|||::|..:||::||:.::||:|||...|||.
Zfish   307 AGRNEIL----MSLCPQVFGMYVVKLAVAMVLAGGVQRIDASGTKVRGESHLLLVGDPGTGKSQF 367

  Fly   350 LRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDR 414
            |:|.....||::.|.|.||:..|||.|...|  :||..|||||:||:|.|:.|||||:.:.:.||
Zfish   368 LKYAAKITPRSVLTAGIGSTNAGLTVAAVKD--SGEWHLEAGALVLSDGGLCCIDEFNSIKEHDR 430

  Fly   415 TAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFV 479
            |:|||.|||..::::|||:...|:.|.::|||.|| .|:||...:...|:.|...|||||||:.|
Zfish   431 TSIHEAMEQQTISVAKAGMVCKLDTRTTILAATNP-KGQYDPNVSVSVNVALASPLLSRFDLVLV 494

  Fly   480 MLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDAL 544
            :||..:.|.|::||..:::      .|.|..|.|.                              
Zfish   495 LLDTKNPDWDKIISSFILQ------NKGAPSESLC------------------------------ 523

  Fly   545 LHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQPITA 609
                       :.|:|.||.|..:.|.:||::..:| ..|.:.|.:|:.| :...:.|||   |.
Zfish   524 -----------LWSMEKMRAYFCLIKTLKPRITPEA-NTILSRYYQLQRQ-SDSRNAART---TI 572

  Fly   610 RTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVL----------DKDRPSKR---- 660
            |.||:|.||:.||||....::||::||...:.:::.:.....|          ..|.|.::    
Zfish   573 RMLESLSRLAEAHARLMFRETVTVEDAVVVVSVMECSMQGGALLGNVNALHTSFPDEPCEQYKTQ 637

  Fly   661 ------------------RRNSGSDAEDDNGEASSQRSPSRRSKRTRTATVGADSDEEDI----- 702
                              :|.||.    .||...|.:||...|:.....|...:...:::     
Zfish   638 CEIVLERLGLSDLLQRELQRLSGL----QNGRPGSPKSPQSHSEHRNENTTSTNHSNQELGLNWF 698

  Fly   703 ------------EPPQP---------DAGDLTRRETRRSLPARSVAMLMASPSSEEQSVATSTTE 746
                        .||.|         ...|:|.|..::.   .||....|..|.||   |...|.
Zfish   699 HSLSSSSNITSNNPPTPVITSTQNATTPPDMTSRNQQQQ---ASVWAKSADVSVEE---AVQETV 757

  Fly   747 PAIISDARLGEFKNNL 762
            ...:...||.|.|..|
Zfish   758 SKKLRGKRLKEMKETL 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 13/81 (16%)
MCM 106..648 CDD:214631 182/600 (30%)
mcm9NP_001333089.1 Mcm2 23..588 CDD:224162 191/664 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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