DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and mcm5

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001017327.2 Gene:mcm5 / 550081 XenbaseID:XB-GENE-985665 Length:735 Species:Xenopus tropicalis


Alignment Length:758 Identity:233/758 - (30%)
Similarity:344/758 - (45%) Gaps:151/758 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DLKRKNPQRALGLLSNAADEQLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTPRSLT 114
            |...|.|...|.||..||.|       :.:..:...|...:..:::.|.........::  |||.
 Frog    87 DYLYKQPTEHLQLLEEAAQE-------VADEVTRPRPAGEETIQEIQVMLRS
DANPANI--RSLK 142

  Fly   115 SIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVP--SGAAYPTKDED 177
            |..:.::|.:.||:...:.:|.|..:....|.:.|..       :.:....|  .|.|.|.|...
 Frog   143 SEQMSHLVKIPGIIIAATAVRAKATKISIQCRSCRNT-------IGNIAVRPGLEGYAMPRKCNT 200

  Fly   178 GNLLETEYGLSVY---------KDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQ 233
            ......:..|..|         .|.|||.:||.|:..|.|:|||.:.:.||..|.|:..||:||.
 Frog   201 EQAGRPKCPLDPYFIIPDKCKCVDFQTLKLQESPDAVPHGELPRHMQLYCDRYLCDKVVPGNRVT 265

  Fly   234 IVGSY--------------RCLPGKRGGY---------TSGTFRTVLLANNISLLSKESNLDISR 275
            |:|.|              |...|.|..|         |.||.|:.  |..|:...:|.      
 Frog   266 IMGIYSIRKSGKTSTKGRDRVGVGIRSSYIRVVGIQVDTEGTGRSA--AGAITPQEEEE------ 322

  Fly   276 EDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIG 340
                 .::|:...||:|.::||:||||:|.:.:|:||.|||.||..|.||:|...|||:|:|::|
 Frog   323 -----FRRLSAKPDIYETVAKSIAPSIYGSSDIKKAIACLLFGGSRKRLPDGLTRRGDVNLLMLG 382

  Fly   341 DPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDE 405
            ||..||||||::|...:|..:.|:|:|||..||||:|..|..:....:|.|||||||.|||||||
 Frog   383 DPGTAKSQLLKFVERCSPIGVYTSGKGSSAAGLTASVMRDPVSRNFIMEGGAMVLADGGVVCIDE 447

  Fly   406 FDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSL 470
            ||||.:.||.||||.|||..::|:||||..:||:|||||||||.||||:|..|.. |||....::
 Frog   448 FDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVYGRWDDTKGE-ENIDFMPTI 511

  Fly   471 LSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDT 535
            |||||::|::.|..:...|..::.||:.:|.               |:...|    ||.|.:.|.
 Frog   512 LSRFDMIFIVKDEHNEQRDMTLAKHVMNVHL---------------SARTQS----SSVEGEIDL 557

  Fly   536 EVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRS---QEAV 597
            ...:||                 :.:.|     ||| .|:|..::.|.:.|.|..:||   ....
 Frog   558 NTLKKY-----------------IAYCR-----AKC-GPRLSAESAEKLKNRYILMRSGARDHER 599

  Fly   598 ETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRR 662
            ||:...:.|||.|.||.::|:|.:..:.::....|..|...|:.|.|.:    .||.........
 Frog   600 ETEKRSSIPITVRQLEAIVRISESLGKMKLQPFATETDVEEALRLFQVS----TLDAAMSGSLSG 660

  Fly   663 NSGSDAEDDNGEASSQRSPSRRSKR-TRTATVGADSDEEDIEPPQPDAGDLTRRETRRSLPARSV 726
            ..|...::|      |...||..|: .|...:|:...|..|      ..|..:::.......:.:
 Frog   661 VEGFTTQED------QEMLSRIEKQLKRRFAIGSQVSEHSI------IQDFLKQKYPEHAIHKVL 713

  Fly   727 AMLMASPSSEEQSVATSTTEPAIISDARLGEFKNNLQR--LFR 767
            .::|                       |.||.::.|||  |:|
 Frog   714 HLMM-----------------------RRGEIQHRLQRKVLYR 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 11/50 (22%)
MCM 106..648 CDD:214631 200/578 (35%)
mcm5NP_001017327.2 MCM_N 36..131 CDD:379644 11/50 (22%)
MCM 134..650 CDD:214631 200/584 (34%)
Arginine finger 513..516 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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