DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and Mcm9

DIOPT Version :10

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001403310.1 Gene:Mcm9 / 499437 RGDID:1560557 Length:1128 Species:Rattus norvegicus


Alignment Length:799 Identity:218/799 - (27%)
Similarity:344/799 - (43%) Gaps:201/799 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HVKDMIAEKSKR-------LIVNVNDLKRKN----------PQRALGLLSNAADEQLAFGRALKE 79
            |..|::....:|       |:||...|...|          |...|.:..:|....     ||..
  Rat    21 HKNDILLILKERDEDAHYPLVVNAMTLFETNMEIGDYFTVFPNEVLTVFDSALRRS-----ALAV 80

  Fly    80 YASTVDPGYAKMHEDLFVGFEG---C--FGNRHVTPRSLTSIYLGNMVCVEGIVTKVSLIRP--- 136
            ..|..:|....|.::|.....|   |  ....|: |::..   :|:.:.|.|.|.:.||::.   
  Rat    81 LQSLPEPEGLSMKQNLHARISGLPVCPELVREHI-PKTKD---VGHFLSVTGTVIRTSLVKVLEF 141

  Fly   137 ---------KVVRSV------HY-------CPNTRKVMERKYTDLTSFEAVPSGAAYPTKDEDGN 179
                     |.|.:|      :|       ||::......|:|.|:...|.|:..          
  Rat   142 ERDYMCNKCKYVFTVKADFEQYYTFSRPSSCPSSDTCDSSKFTCLSDLSASPARC---------- 196

  Fly   180 LLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVG-------- 236
                       :|:|.:.|||..::...|.:|||:.::.:|||||.||.||.:.|.|        
  Rat   197 -----------RDYQEIKIQEQVQRLSVGSIPRSMKVILEDDLVDSCKSGDDLTIYGVVMQRWKP 250

  Fly   237 ---SYRCLPGKRGGYTSGTFRTVLLANNISLLSKESNLDISREDIMLCKK-------------LA 285
               ..||           ....||.||.:.:.:::|:..:..||   .:|             .|
  Rat   251 FQRDMRC-----------EVEIVLKANYVQVNNEQSSGMVMDED---ARKEFEDFWEHYKSDPFA 301

  Fly   286 KNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPSVAKSQLL 350
            ..|:|.    .||.|.:.|...||.|:..:|.||:::....|||:||:.::||:|||...|||.|
  Rat   302 GRNEIL----ASLCPQVFGMYLVKLAVAMVLAGGIQRTDAAGTRVRGESHLLLVGDPGTGKSQFL 362

  Fly   351 RYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRT 415
            :|.....||::.|||.||:..|||  ||..:::||..|||||:||||.|:.|||||:.:.:.|||
  Rat   363 KYAAKITPRSVLTTGIGSTSAGLT--VTAVKDSGEWNLEAGALVLADAGLCCIDEFNSLKEHDRT 425

  Fly   416 AIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVM 480
            :|||.|||..::::|||:...||.|.::|||.|| .|:||..::...||.|...|||||||:.|:
  Rat   426 SIHEAMEQQTISVAKAGLVCKLNTRTTILAATNP-KGQYDPQESVSVNIALGSPLLSRFDLILVL 489

  Fly   481 LDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALL 545
            ||..:.|.|::||..::         |..|.|                                 
  Rat   490 LDTRNEDWDRIISSFIL---------ENKGYP--------------------------------- 512

  Fly   546 HGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQPITAR 610
                 .:.|.:.|:|.|:.|..:.:.:.|.|.:.:.:.:...|...|..::  .:.|||   |.|
  Rat   513 -----SKSENLWSMEKMKTYFCLIRNLHPTLSDVSNQVLLRYYQMQRQSDS--RNAART---TIR 567

  Fly   611 TLETLIRLSTAHARARMSKSVTIDDAHAAIELVQF------------AYFKKVLDKDRPSKRRRN 663
            .||:||||:.||||.....:||::||...:.:::.            |......:..|...||: 
  Rat   568 LLESLIRLAEAHARLMFRSTVTLEDAITVVSVMESSMQGGALLGGVNALHTSFPESPRAQYRRQ- 631

  Fly   664 SGSDAEDDNGEASS-QRSPSRRSKRTRTATVGADSDEEDIEPPQPDAGDLTRRETRRSLPARSVA 727
              .:...:..|..| .:...||.:|.:.     :||:.....|:.:|...:.|...|..|.    
  Rat   632 --CELILEKLELQSLLQEELRRLERLQN-----ESDQCQPHSPEVEAAPGSCRNDPRDRPG---- 685

  Fly   728 MLMASPSSEEQSVATSTTE 746
              :.:|:.:|||.:.|..|
  Rat   686 --LRTPTQQEQSCSWSPAE 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 13..101 CDD:464206 17/85 (20%)
MCM 106..648 CDD:214631 178/602 (30%)
Mcm9NP_001403310.1 MCM_OB 116..243 CDD:465381 36/150 (24%)
MCM9 305..603 CDD:350666 126/356 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 657..737 13/57 (23%)
PHA03307 667..>1014 CDD:223039 11/42 (26%)

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