DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and mcm2

DIOPT Version :10

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001006772.1 Gene:mcm2 / 448458 XenbaseID:XB-GENE-999974 Length:884 Species:Xenopus tropicalis


Alignment Length:782 Identity:259/782 - (33%)
Similarity:379/782 - (48%) Gaps:132/782 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EGEQFIKDIQ----------REYV--------------DFLD---DEEDQGIYAGHVKDMIAEKS 41
            |.|:.|:.|:          ||:|              :||.   ||....::...:.||..|..
 Frog   148 EDEEMIESIENLEDMKGHTVREWVSMAATRLEIYHRFKNFLRTHVDEHGHNVFKEKISDMCKENK 212

  Fly    42 KRLIVNVNDLKRKNPQRALGLLSNAADEQLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNR 106
            :.|:||..||..:....|..|....|:....|..|.||....:.|.|.::..::.|...      
 Frog   213 ESLVVNYEDLAAREHVLAYFLPEAPAEMLKIFDEAAKEVVLVMYPKYDRIAREIHVRIS------ 271

  Fly   107 HVTP-----RSLTSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVP 166
            |: |     |||..::|..::...|:||..:.:.|::....:.|.....::...:.  :..:.|.
 Frog   272 HL-PLVEELRSLRQLHLNQLIRTSGVVTCCTGVLPQLSMVKYNCNKCNFILGPFFQ--SQNQEVK 333

  Fly   167 SGAAYPTKDEDG----NLLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCK 227
            .|:. |.....|    |:.||     ||:::|.:||||.|.|..||:||||.|.:...||||.||
 Frog   334 PGSC-PECQSLGPFEINMEET-----VYQNYQRITIQESPGKVAAGRLPRSKDAILLADLVDSCK 392

  Fly   228 PGDRVQIVGSYRCLPGKRGGYTSG--------TFRTVLLANNISLLSKESNL---DISREDIMLC 281
            |||.:::.|:|      ...|...        .|.||:|||:|:  .|:..:   :::.||:...
 Frog   393 PGDEIELTGTY------HNNYDGSLNTANGFPVFATVILANHIT--KKDDKVAVGELTDEDVKAI 449

  Fly   282 KKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGT-RLRGDINVLLIGDPSVA 345
            ..|:|:..|.|.:..|:||||:||..:|:.:...|.||..| .|.|. ::||||||||.|||..|
 Frog   450 VALSKDERIGERIFASIAPSIYGHEDIKRGLALALFGGEAK-NPGGKHKVRGDINVLLCGDPGTA 513

  Fly   346 KSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMS 410
            |||.|:||...|.||:.|||:|:|.|||||.|.....|.|..|||||:|||||||..|||||||:
 Frog   514 KSQFLKYVEKVASRAVFTTGQGASAVGLTAYVQRHPVTKEWTLEAGALVLADRGVCLIDEFDKMN 578

  Fly   411 DIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFD 475
            |.|||:|||.|||..::||||||..||.|||:::||:||:.||||...|..||:.|.:.::||||
 Frog   579 DQDRTSIHEAMEQQSISISKAGIVTSLQARCTIIAASNPIGGRYDPSLTFSENVDLTEPIVSRFD 643

  Fly   476 LLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEK 540
            :|.|:.|.:|...|:|::..||..|...:|...|   ::.|..:|...:|   ..|....||.:|
 Frog   644 ILCVVRDTVDPVQDEMLARFVVGSHIKHHPSSKD---IANGEEFALPNTF---GVEPLPQEVLKK 702

  Fly   541 YDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQ 605
            |                 :.:.::.||      |||.:...:.:|..||.||.:......:    
 Frog   703 Y-----------------IMYSKEKIH------PKLNQMDQDKVAKMYSDLRKESMATGSI---- 740

  Fly   606 PITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDA-- 668
            |||.|.:|::||::.||||..:...|..||.:.||.::    .:..:|..:.|..|....:.|  
 Frog   741 PITVRHIESMIRMAEAHARMHLRDYVVEDDVNMAIRVM----LESFIDTQKFSVMRSMRKTFARY 801

  Fly   669 ---EDDNGE---------ASSQRSPSRRSKRTRTATVGADSDEEDIEPPQPDAGDLTRRETRRSL 721
               ..||.|         .:.|.|..|.       ..||..|  .||.|:.|..|..|:....:|
 Frog   802 LAFRRDNNELLLFVLKQLVAEQTSYQRN-------RYGAQQD--TIEVPEKDLVDKARQINIHNL 857

  Fly   722 PA 723
            .|
 Frog   858 SA 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 13..101 CDD:464206 25/114 (22%)
MCM 106..648 CDD:214631 209/562 (37%)
mcm2NP_001006772.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
MCM2_N 56..167 CDD:403724 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..151 1/2 (50%)
MCM_N 182..272 CDD:464206 22/95 (23%)
MCM 276..783 CDD:214631 207/560 (37%)
Arginine finger 640..643 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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