DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm3 and MCM4

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_005905.2 Gene:MCM4 / 4173 HGNCID:6947 Length:863 Species:Homo sapiens


Alignment Length:858 Identity:245/858 - (28%)
Similarity:386/858 - (44%) Gaps:202/858 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQFIKDIQREYVDFLDDEED-------QGIYAGHVKDMIAEKSKRLIVNVNDLKR--KN------ 55
            |.|.:.:|| ::|.|..||:       :.:|...:.::.......|.||...:|.  ||      
Human   164 ENFQRFLQR-FIDPLAKEEENVGIDITEPLYMQRLGEINVIGEPFLNVNCEHIKSFDKNLYRQLI 227

  Fly    56 --PQRALGLLSNAADEQLAFGR---ALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTPRSLTS 115
              ||..:.....|.:| :.|.|   ::.|:...|.|..|...:::          |::.|..   
Human   228 SYPQEVIPTFDMAVNE-IFFDRYPDSILEHQIQVRPFNALKTKNM----------RNLNPED--- 278

  Fly   116 IYLGNMVCVEGIVTKVSLIRPKVVRSVHYCP----NTRKVMERKYTDLTSFEAVPS--GAAYPTK 174
              :..::.:.|:|.:.|.:.|::..:...|.    .||..|:|...      |.||  |..:.| 
Human   279 --IDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEMDRGRI------AEPSVCGRCHTT- 334

  Fly   175 DEDGNLLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYR 239
                :.:...:..|::.|.|.:.:||.||..||||.|.:|.:...:||||:.:|||||.:.|.||
Human   335 ----HSMALIHNRSLFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKVQPGDRVNVTGIYR 395

  Fly   240 CLP---GKRGGYTSGTFRTVL--------LANNISLLSKESNLDI-SREDIMLCKKLAKNNDIFE 292
            .:|   ..|.......::|.:        .|..:..|.:|:...: |.:.:.|.|:|::..||:|
Human   396 AVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYE 460

  Fly   293 LLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTR--LRGDINVLLIGDPSVAKSQLLRYVLN 355
            .|:.:|||||:.|..:|:.||..|.||..|...:..|  .|.:||:||.|||..:|||||:||.|
Human   461 RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYN 525

  Fly   356 TAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEV 420
            ..||...|:|:|||.|||||.|..|.||.:..|:.||:||:|.|:.||||||||::..|:.:|||
Human   526 LVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEV 590

  Fly   421 MEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVID 485
            |||..::|:||||...||||.||||||||:..:::..||.:|||.|..:|||||||:|::||..|
Human   591 MEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLLLDPQD 655

  Fly   486 SDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSR 550
            ...|:.::.|:|.:: |::.::|:                    ||..|..|.:.|.|..|    
Human   656 EAYDRRLAHHLVALY-YQSEEQAE--------------------EELLDMAVLKDYIAYAH---- 695

  Fly   551 QRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQPITA---RTL 612
                               ..:.|:|.|:|.:|:...|..:|.       :..::.:.:   |.|
Human   696 -------------------STIMPRLSEEASQALIEAYVDMRK-------IGSSRGMVSAYPRQL 734

  Fly   613 ETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDAEDDNGEASS 677
            |:||||:.|||:.|:|..|...|...|..|.:.|.              :.|.:|          
Human   735 ESLIRLAEAHAKVRLSNKVEAIDVEEAKRLHREAL--------------KQSATD---------- 775

  Fly   678 QRSPSRRSKRTRTATVGADSDEEDIEPPQPDAGDLTRRETRRSLPARSVAMLMASPSSEEQSVAT 742
                      .||..|              |...||..              |::.|.:.:....
Human   776 ----------PRTGIV--------------DISILTTG--------------MSATSRKRKEELA 802

  Fly   743 STTEPAIISDARLGEFKNNLQRLFREAREQS-LALARITTAINVGSQEPFTAGEIEAAVHRMTED 806
            ...:..|:|..:....|  .|:||.:.|.|| :|:               |....|.|:..:.:|
Human   803 EALKKLILSKGKTPALK--YQQLFEDIRGQSDIAI---------------TKDMFEEALRALADD 850

  Fly   807 NQIMVADDIVFLI 819
            :.:.|....|.|:
Human   851 DFLTVTGKTVRLL 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 21/102 (21%)
MCM 106..648 CDD:214631 193/564 (34%)
MCM4NP_005905.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..126
MCM_N 163..263 CDD:405270 23/100 (23%)
MCM 267..770 CDD:214631 193/593 (33%)
Arginine finger 642..645 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.