DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm3 and Mcm7

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster


Alignment Length:697 Identity:232/697 - (33%)
Similarity:349/697 - (50%) Gaps:118/697 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EGEQFIKDIQREYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAAD 68
            :..:.||....|:....||.:.:.:|...:..:...:...:.::::||...|...|..::.|...
  Fly     8 QDRESIKTFLSEFCKCDDDGKKEFVYGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVVDNCRR 72

  Fly    69 EQLAFGRALKEYASTVDPGY------AKMHEDLF------------------------------- 96
            ....|...:.|..    |.|      ||...|::                               
  Fly    73 YTSIFSDVIAELL----PSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSELMKR 133

  Fly    97 --VGFEGCFGNRHVTPRSLTSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDL 159
              |||:.....:..:.|.:.:.::|.:|.|.||||:.:.::|.:|.:.:.|.   :.....|..:
  Fly   134 FEVGFKPLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCD---RCGSETYQPV 195

  Fly   160 TSFEAVPSGAAYPTKD----EDGNLLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDD 220
            .|....|.... |:.|    :.|..|..:...|.:...|.:.:||..::.|.|.:|||:.|:|..
  Fly   196 NSLSFTPVHDC-PSDDCRVNKAGGRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIMCRG 259

  Fly   221 DLVDRCKPGDRVQIVGSYRCLPGKRGGYT-------SGTFRTVLLANNISLLSKESNLDISREDI 278
            ::....:|||.:.:.|.:  ||..|.|:.       |.||   |.|:.|..::|  |.:||.:|.
  Fly   260 EVTRMAQPGDHIVVSGVF--LPLMRTGFAQMIQGLLSETF---LQAHRIICINK--NDEISDKDA 317

  Fly   279 ML----CKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLI 339
            .|    .::||: :|.:|.|:.||||.|:||..||:|:|.||:|||:| .|:|.::||:||:.|:
  Fly   318 ELTPEELEELAQ-DDFYERLATSLAPEIYGHLDVKKALLLLLVGGVDK-RPDGMKIRGNINICLM 380

  Fly   340 GDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCID 404
            |||.|||||||.|:...|.|:..|||||||||||||||..|..|||..||.||:||||:||.|||
  Fly   381 GDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLTGEMTLEGGALVLADQGVCCID 445

  Fly   405 EFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDS 469
            |||||:|.|||||||||||..::|:||||..:||||.|:||||||.:|||:..:|..:||.|..:
  Fly   446 EFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAANPAFGRYNPRRTVEQNIQLPAA 510

  Fly   470 LLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKD 534
            ||||||||:::.|..|.|.|..::.|:..:|.                                 
  Fly   511 LLSRFDLLWLIQDKPDRDNDLRLAKHITYVHS--------------------------------- 542

  Fly   535 TEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRSQEAVET 599
                       |.|......|.|.:..||:||::.|...|.:.::..:.|...|..||.:...:.
  Fly   543 -----------HSKQPPTRVKALDMNLMRRYINLCKRKNPTIPDELTDYIVGAYVELRREARNQK 596

  Fly   600 DVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFA 646
            |:..|   :||.|..::|||||.||.|:|.||..||...|:.|::.:
  Fly   597 DMTFT---SARNLLGILRLSTALARLRLSDSVEKDDVAEALRLLEMS 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 18/121 (15%)
MCM 106..648 CDD:214631 211/556 (38%)
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 16/87 (18%)
MCM 145..641 CDD:214631 211/556 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446135
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15169at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.