DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and Mcm6

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster


Alignment Length:767 Identity:223/767 - (29%)
Similarity:355/767 - (46%) Gaps:147/767 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AHEGEQFIKD-----IQREYVDFLDDEEDQG--IYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRA 59
            |..|:..:||     .|:.:.|||::.::.|  .|......:.:.....|.|:..|:::.:...|
  Fly     6 AQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLA 70

  Fly    60 LGLLSNAADEQLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTPRSLTSIYLGNMVCV 124
            ..::...........:::..|..  |....|..:|.:|.|.. ...||.. |.||:..:|.::.:
  Fly    71 TAIIEEYYHIYPFLCQSVSNYVK--DRIGLKTQKDCYVAFTE-VPTRHKV-RDLTTSKIGTLIRI 131

  Fly   125 EGIVTKVSLIRPKVVRSVHYC----PNTRKVMER-KYTDLTSFEAVPSGAAYPT-KDEDGNLLET 183
            .|.|.:...:.|::|..|..|    ...|.|.:: |:|:       |:....|. .:....:|:.
  Fly   132 SGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQFKFTN-------PTICRNPVCSNRKRFMLDV 189

  Fly   184 EYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVG------------ 236
            |  .|::.|.|.:.|||...:.|.|.:||:|:|:...:||:..:.|||....|            
  Fly   190 E--KSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSVLA 252

  Fly   237 --------SYRCLPG---------KRGGYTSGTFRTVLLANNISLLSKE---SNL---DISREDI 278
                    |.|..||         |..|.....:|...||.::...:..   ::|   :::.||:
  Fly   253 GVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDLPMSEVTAEDM 317

  Fly   279 MLCKK------------LAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLR 331
               ||            ::|:.::::.|..||.|||:|:..||:.||....|||.|.....|.||
  Fly   318 ---KKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEKTSLR 379

  Fly   332 GDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLA 396
            |||||.::||||.||||.|:.|.:.:||||.|:|:.||..||||||..|:|:.:..:||||::||
  Fly   380 GDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLA 444

  Fly   397 DRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPM 461
            |.|:.||||||||...|:.||||.|||..::|::||:.|:||||.|:||||||:.||||:.|:..
  Fly   445 DNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRSKSLQ 509

  Fly   462 ENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFV 526
            :||.|...::|||||.|:::|..:..||..|:..:|.:|                       |.:
  Fly   510 QNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLH-----------------------SNI 551

  Fly   527 SSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRL 591
            ..|.|:..|                 .|::|      :|:..|:..||.:.::|...:...|..|
  Fly   552 EESVERAYT-----------------REEVL------RYVTFARQFKPVISQEAGHMLVENYGHL 593

  Fly   592 RSQEAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDR 656
            | |....|....|..||.|.||::||||.|.|:...|..|.......|..|:.    |.::..::
  Fly   594 R-QRDTGTSGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLN----KSIIRVEQ 653

  Fly   657 PSKR------------------RRNSGSDA--EDDNGEASSQRSPSRRSKRT 688
            |...                  ..|:|:.|  :::||..:|.....::.|.|
  Fly   654 PDIHLDDDEGLDMDDGIQHDIDMENNGAAANVDENNGMDTSASGAVQKKKFT 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 15/84 (18%)
MCM 106..648 CDD:214631 193/594 (32%)
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 14/85 (16%)
MCM 113..649 CDD:214631 194/599 (32%)
MCM6_C 702..816 CDD:375690 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469744
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15169at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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