DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and Mcm2

DIOPT Version :10

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001101343.2 Gene:Mcm2 / 312538 RGDID:1305577 Length:905 Species:Rattus norvegicus


Alignment Length:751 Identity:246/751 - (32%)
Similarity:372/751 - (49%) Gaps:103/751 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DIQREYVDFLD---DEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAADEQLA 72
            :|...:.:||.   |.....::...:.||..|..:.|:||..||..:....|..|....|:....
  Rat   195 EIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEAPAELLQI 259

  Fly    73 FGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTP-----RSLTSIYLGNMVCVEGIVTKVS 132
            |..|..|....:.|.|.::...:.|...      |: |     |||..::|..::...|:||..:
  Rat   260 FDEAALEVVLAMYPKYDRITNHIHVRIS------HL-PLVEELRSLRQLHLNQLIRTSGVVTSCT 317

  Fly   133 LIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVPSGAAYPTKDEDG----NLLETEYGLSVYKDH 193
            .:.|::....:.|.....:: ..:....:.|..|...  |.....|    |:.||     :|:::
  Rat   318 GVLPQLSMVKYNCSKCNFIL-GPFCQSQNQEVKPGSC--PECQSTGPFEINMEET-----IYQNY 374

  Fly   194 QTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYRCLPGKRGGY------TSG- 251
            |.:.|||.|.|..||:||||.|.:...||||.|||||.:::.|.|      ...|      |:| 
  Rat   375 QRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIY------HNNYDGSLNTTNGF 433

  Fly   252 -TFRTVLLANNISLLSKESNL---DISREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAI 312
             .|.|::|||:::  .|::.:   :::.||:.:...|:|:..|.|.:..|:||||:||..:|:.:
  Rat   434 PVFATIILANHVA--KKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGL 496

  Fly   313 LCLLLGGVEKILPNGT-RLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAA 376
            ...|.||..| .|.|. ::||||||||.|||..||||.|:|:...:.|||.|||:|:|.|||||.
  Rat   497 ALALFGGEPK-NPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAY 560

  Fly   377 VTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARC 441
            |.....:.|..|||||:|||||||..|||||||:|.|||:|||.|||..::||||||..||.|||
  Rat   561 VQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARC 625

  Fly   442 SVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPK 506
            :|:|||||:.||||...|..||:.|.:.::||||:|.|:.|.:|...|:|::..||..|...:|.
  Rat   626 TVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDVLCVVRDTVDPVQDEMLARFVVGSHVRHHPS 690

  Fly   507 EADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAK- 570
            ....|.|:.|.:...::......|.                         |..|.::|||..|| 
  Rat   691 NKKDEGLTNGGTTEPAMPNTYGVEP-------------------------LPQEVLKKYIIYAKE 730

  Fly   571 CMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDD 635
            .::|||.:...:.:|..||.||.:......:    |||.|.:|::||::.||||..:...|..||
  Rat   731 RVRPKLNQMDQDKVARMYSDLRKESMATGSI----PITVRHIESMIRMAEAHARMHLRDYVMEDD 791

  Fly   636 AHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDA------EDDNG-------EASSQRSPSRRSKR 687
            .:.||.::    .:..:|..:.|..|....:.|      .|:|.       :..:::...:|:: 
  Rat   792 VNMAIRVM----LESFIDTQKFSVMRSMRKTFARYLSFRRDNNDLLLFILKQLVAEQVTYQRNR- 851

  Fly   688 TRTATVGADSDEEDIEPPQPDAGDLTRRETRRSLPA 723
                 .||..|  .||.|:.|..|..|:....:|.|
  Rat   852 -----FGAQQD--TIEIPEKDLMDKARQINIHNLSA 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 13..101 CDD:464206 20/90 (22%)
MCM 106..648 CDD:214631 207/563 (37%)
Mcm2NP_001101343.2 MCM2_N 73..183 CDD:403724
MCM_N 198..288 CDD:464206 20/95 (21%)
MCM 292..804 CDD:214631 205/561 (37%)
Blue background indicates that the domain is not in the aligned region.

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