DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and Mcm7

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001004203.3 Gene:Mcm7 / 288532 RGDID:1303018 Length:719 Species:Rattus norvegicus


Alignment Length:706 Identity:232/706 - (32%)
Similarity:361/706 - (51%) Gaps:131/706 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GEQFIKDIQRE----YVDFLDD--EED--------------QGIYAGHVKDMIAEKSKRLIVNVN 49
            |.|.:....||    ||| |||  |:|              ..::|..|::::.|..::.:||  
  Rat    34 GTQLVHLAHREQVALYVD-LDDVAEDDPELVDSICENAKRYSRLFADVVQELLPEYKEKEVVN-- 95

  Fly    50 DLKRKNPQRALGLLSNAADEQLAFGRALKEYASTVDPGYAKMHEDLF---------VGFEGCFGN 105
                          .:..|..:.. |.:.|..|. |||..:..::.:         :.|:|...:
  Rat    96 --------------KDVLDVYIEH-RLMMEQRSR-DPGAVRNPQNQYPSELMRRFELYFQGPSSS 144

  Fly   106 RHVTPRSLTSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVPSGAA 170
            :....|.:.:..:|.::.|.||||:||.::|::|.:.:.|..         ....:::.:.|...
  Rat   145 KPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQ---------CGAETYQPIQSPTF 200

  Fly   171 YP----------TKDEDGNLLETEYGLSVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDR 225
            .|          |....|.|.....| |.:...|.:.|||..::.|.|.:|||:.:|.:.:....
  Rat   201 MPLIMCPSQECQTNRSGGRLYLQTRG-SKFIKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRI 264

  Fly   226 CKPGDRVQIVGSYRCLPGKRGGY---TSGTF-RTVLLANNISLLSK-ESNL----DISREDIMLC 281
            .:|||.|.:.|.:  ||..|.|:   ..|.. .|.|.|:.:..::| |.::    ::|.|::   
  Rat   265 AQPGDHVSVTGIF--LPVLRTGFQQMAQGLLSETYLEAHRVVKMTKSEDDVSGAGELSAEEL--- 324

  Fly   282 KKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPSVAK 346
            |::|: .|.:|.|:.|:||.|:||..||:|:|.||:|||:: .|.|.::||:|::.|:|||.|||
  Rat   325 KQIAE-EDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQ-SPQGMKIRGNIHICLMGDPGVAK 387

  Fly   347 SQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSD 411
            ||||.|:...|||:..|||||||||||||||..|..:||..||.||:||||:||.||||||||::
  Rat   388 SQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE 452

  Fly   412 IDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDL 476
            .|||||||||||..::|:||||..:||||||:||||||.||||:..::..:||.|..:|||||||
  Rat   453 ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDL 517

  Fly   477 LFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKY 541
            |:::.|..|.|.|..::.|:..:|::.....|..|||.|                          
  Rat   518 LWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDM-------------------------- 556

  Fly   542 DALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQP 606
                              :.||:||.:.:..:|.:.:...:.|...|..:|.:.....|...|  
  Rat   557 ------------------KLMRRYIAMCRERQPTVPDSLADYITAAYVEMRREARASKDATYT-- 601

  Fly   607 ITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRR 662
             :||||..::|||||.||.||...|..:|.:.||.|::.:....:.:|.:.::.:|
  Rat   602 -SARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLLGEKGQTARTQR 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 19/107 (18%)
MCM 106..648 CDD:214631 204/560 (36%)
Mcm7NP_001004203.3 MCM_N 12..165 CDD:291233 29/149 (19%)
MCM 145..641 CDD:214631 204/559 (36%)
P-loop_NTPase 376..515 CDD:304359 89/138 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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