DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and mcm5

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_848523.2 Gene:mcm5 / 286747 ZFINID:ZDB-GENE-021209-1 Length:736 Species:Danio rerio


Alignment Length:726 Identity:224/726 - (30%)
Similarity:341/726 - (46%) Gaps:128/726 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NVNDLKRKNPQRALGLLSNAADE---QLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHV 108
            :::|...|.|...|.||..||.|   ::...|.:.|  .||......:..|.          ...
Zfish    84 DLSDCLYKLPSENLPLLEEAAQEVADEVTRPRPVGE--ETVQDIQVMLKSDA----------HPA 136

  Fly   109 TPRSLTSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVP-----SG 168
            :.|||.|..:..:|.:.||:...:.:|.|..|....|...|.|:..          :|     .|
Zfish   137 SIRSLKSEQVSRLVKIPGIIISSTAVRAKATRVCLQCRGCRAVISN----------IPLPPGLQG 191

  Fly   169 AAYPTK---DEDGNL---LETEYGL---SVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVD 224
            .|.|.|   ::.|.:   ::..:.:   .|..|.||..:||.|:..|.|::||.:.:.||..|.|
Zfish   192 YALPRKCNTEQAGRVKCPVDPYFIIPDRCVCVDFQTQRLQEAPDAVPHGEMPRHMQLYCDRYLCD 256

  Fly   225 RCKPGDRVQIVGSY---RCLPGKRGGYTSGT--------FRTVLLANNISLLSKESNLDISREDI 278
            |..||:||.::|.|   :....|..|...||        .|.|.:..:.....:.:...:|.::.
Zfish   257 RVVPGNRVTVMGIYSIKKVAQTKAKGRDKGTGVGIRSAYLRVVGIDVDTEGAGRGATGSVSPQEE 321

  Fly   279 MLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPS 343
            ...:.||.:..:::.|::||||||:|...:|:||.|||.||..|.||:|...|||||:|::|||.
Zfish   322 EELRSLAASPSVYDSLARSLAPSIYGSDDLKKAIACLLFGGSRKRLPDGLTRRGDINLLMLGDPG 386

  Fly   344 VAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDK 408
            .||||||::|...:|..:.|:|:|||..||||:|..|..|....:|.|||||||.||||||||||
Zfish   387 TAKSQLLKFVERCSPIGVYTSGKGSSAAGLTASVLRDPTTRGFVMEGGAMVLADGGVVCIDEFDK 451

  Fly   409 MSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSR 473
            |.:.||.||||.|||..::|:||||..:||:|||||||||.|:||:|..|.. :||....::|||
Zfish   452 MREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDDTKGE-DNIDFMPTILSR 515

  Fly   474 FDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVY 538
            ||::|::.|..|...|..::.||:.:|                         :|:..:.:..|  
Zfish   516 FDMIFIIKDHHDQQRDMTLARHVMNVH-------------------------LSAQTQTEGVE-- 553

  Fly   539 EKYDALLHGKSRQRHEKILSVEFMRKYIHIA--KCMKPKLGEQACEAIANEYSRLRS---QEAVE 598
                    |:        :.:..::|||..:  || .|:|...|.|.:.|.|..:||   :...|
Zfish   554 --------GE--------IPLATLKKYIAYSRVKC-GPRLSAAAAEKLKNRYVLMRSGAKEHERE 601

  Fly   599 TDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRN 663
            ||...:.|||.|.||.::|::.:.|:.::......::...|:.|.|.:    .||..........
Zfish   602 TDRRVSIPITVRQLEAVVRIAESLAKMKLQPIAGEEEVDEALRLFQVS----TLDAALSGSLSGV 662

  Fly   664 SGSDAEDDNGEASSQRSPSRRSKR-TRTATVGADSDEEDI-----EPPQPD------------AG 710
            .|...::|      |...||..|: .|...:|:...|..|     :...|:            .|
Zfish   663 EGFTTQED------QEMISRIEKQLKRRFAIGSQVSEHSIIQDFAKQKYPEHAIQKVLYLMLRRG 721

  Fly   711 DLTRRETRRSL 721
            :|..|..|:.|
Zfish   722 ELQHRMQRKVL 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 14/56 (25%)
MCM 106..648 CDD:214631 192/571 (34%)
mcm5NP_848523.2 MCM_N 35..154 CDD:291233 19/81 (23%)
MCM 134..651 CDD:214631 192/575 (33%)
AAA 378..522 CDD:99707 82/144 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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