DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and mcm-3

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_506706.1 Gene:mcm-3 / 180010 WormBaseID:WBGene00003155 Length:812 Species:Caenorhabditis elegans


Alignment Length:835 Identity:416/835 - (49%)
Similarity:554/835 - (66%) Gaps:66/835 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KDIQREYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAADE----- 69
            ::|..:|::|||::.|...|...:..|:.:...||::|:::::...|:||.|||:.:..|     
 Worm    19 QEITEQYLNFLDNQADTFHYRQKIVKMMNDGESRLVMNLDEIREILPERAEGLLTQSVLEMNCLQ 83

  Fly    70 ---QLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTPRSLTSIYLGNMVCVEGIVTKV 131
               |:|..|:  :..:.|..|:       .|||||.||.|||.||:|.|.||||:||.||||||.
 Worm    84 SALQMAINRS--DVQAVVKTGF-------HVGFEGTFGERHVNPRTLKSSYLGNLVCCEGIVTKC 139

  Fly   132 SLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVPSGAAYPTKDEDGNLLETEYGLSVYKDHQTL 196
            |.:|.|::.||||||.|.||:|:|:.|.|..:...:...|||:||:.|.||||:|.||||||||.
 Worm   140 STVRQKLLTSVHYCPATNKVLEKKFADFTMLDTAVTNNNYPTEDENKNPLETEFGHSVYKDHQTF 204

  Fly   197 TIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYRCLPGKRGGYTSGTFRTVLLANN 261
            ||||:||.||||||||:||.|.|.||.||.||||||:|:|.:|.||.|:.|.:||:||::::.|:
 Worm   205 TIQELPESAPAGQLPRAVDCVADLDLADRVKPGDRVRIIGVFRVLPNKQNGVSSGSFRSIIIINH 269

  Fly   262 ISLLSKESNLDISREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPN 326
            |.:||||...:...:|:...:|::|:.:.||||::||||||.||...|:|:|||||||:||||.|
 Worm   270 IQMLSKEVIPNFEPQDVKDVRKISKSRNPFELLARSLAPSICGHEETKKALLCLLLGGMEKILNN 334

  Fly   327 GTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAG 391
            |:||||||||||||||||||||||||||..|||||.||||||||||||||||||.::||||||||
 Worm   335 GSRLRGDINVLLIGDPSVAKSQLLRYVLRMAPRAITTTGRGSSGVGLTAAVTTDPDSGERRLEAG 399

  Fly   392 AMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQ 456
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||:.
 Worm   400 AMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHAKLNARCSVLAAANPVYGRYNP 464

  Fly   457 YKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYAD 521
            :|:||||||:||||||||||:||:||..|:|.|..:::||:::|.||...||||..|.||.. .:
 Worm   465 FKSPMENIGMQDSLLSRFDLIFVLLDEHDADKDANVAEHVLKLHTYRTQGEADGTVLPMGGG-VE 528

  Fly   522 SLSFVSSSEEKKDTEVYEKYDALLHGKSRQ----RHEKILSVEFMRKYIHIAKCMKPKLGEQACE 582
            ::|.::...:|..:.:||        ::.|    :..|||:::|||||||:|:.::|||.::|.|
 Worm   529 TISTINMETKKASSSIYE--------ENTQWAGIQDTKILTMDFMRKYIHLARSVQPKLTDEATE 585

  Fly   583 AIANEYSRLRSQEAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAY 647
            .|:..|:.:||.:..:||..||.|:|||.||||||||||.|:||.||.|..:|...|..|:.||.
 Worm   586 YISEVYADIRSFDITKTDQERTMPVTARQLETLIRLSTAIAKARFSKKVEREDTEKAYNLLHFAC 650

  Fly   648 FK-KVLDKDRPSKRRRNSGSDAEDDNGEASSQRSPSRRSKRTRTATVGADSDEEDI---EPPQ-- 706
            || |...:....|::|....|.:||..:                      ||.||:   |.||  
 Worm   651 FKEKPKARQEYEKKKRAPRIDGDDDEDQ----------------------SDNEDMATSEEPQSS 693

  Fly   707 --PDAGDLTRRETRRSLPARSVAMLMASPSSEEQSVA-TSTTEPAIISDARLGEFKNNLQRLFRE 768
              |.|....|...||:....|...:|.:...|.|..| .:.|.||.|...|..|.:..:::.|.:
 Worm   694 SVPTAATPRRGVRRRAEDDDSQDSMMDTTIGESQPTAKKARTGPAAIGVDRYKELRKYVRKAFDD 758

  Fly   769 --AREQSLALARITTAI--NVGSQEPFTAGEIEAAVHRMTEDNQIMVADDIVFLI 819
              :.:..:.|..||.::  ..||.: ||..|::|...::..||..|:|:|.:.||
 Worm   759 IGSTDDMVELQIITDSVQTQAGSHK-FTEDELKAGYEQLENDNAAMIAEDKITLI 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 24/90 (27%)
MCM 106..648 CDD:214631 338/545 (62%)
mcm-3NP_506706.1 MCM_N 25..109 CDD:379644 25/92 (27%)
MCM 114..649 CDD:214631 336/543 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167034
Domainoid 1 1.000 351 1.000 Domainoid score I537
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 738 1.000 Inparanoid score I306
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53768
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0004045
OrthoInspector 1 1.000 - - oto19817
orthoMCL 1 0.900 - - OOG6_101598
Panther 1 1.100 - - LDO PTHR11630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R693
SonicParanoid 1 1.000 - - X2791
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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