DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and mcm-6

DIOPT Version :10

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001023011.1 Gene:mcm-6 / 176385 WormBaseID:WBGene00003158 Length:810 Species:Caenorhabditis elegans


Alignment Length:766 Identity:226/766 - (29%)
Similarity:360/766 - (46%) Gaps:189/766 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IQREYVDFL---DDEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAADEQLAF 73
            :|.|:..||   .|::::.||...:|:::..:...:.:|:..|.:         .||        
 Worm    20 VQNEFSKFLKSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYK---------FSN-------- 67

  Fly    74 GRALKEYASTVDPGYAKMH-------------------------EDLFVGFEGCFGNRHVTPRSL 113
                 ..|:|::..|.:::                         :.|:|..........|  |.|
 Worm    68 -----NLATTIELQYYRVYPFMCEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKV--REL 125

  Fly   114 TSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPN----TRKVMER-KYTDLTSFEAVPSGAAYPT 173
            ::..:|.:|.:.|.:.:...:.|::.|:...|.:    ||.|.:: :||.             ||
 Worm   126 SADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQ-------------PT 177

  Fly   174 KDEDGNLL-ETEYGL----SVYKDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQ 233
            |..:...: .|.:.|    |.:.|.|.:.|||...:.|.|.:||:||::...::|:..:|||:..
 Worm   178 KCANPQCMNRTRFSLDVNSSTFVDFQKIRIQETQAELPRGSIPRTVDVIVRGEMVETVQPGDKCD 242

  Fly   234 IVGSYRCLPG----------------KRG---------------GYTSGTFRTVLLANNI----S 263
            |||:...:|.                .||               |....|::...||.:|    |
 Worm   243 IVGTLIVIPDIAQLSTPGLRAETSNQNRGRATDKSEGITGLKALGVRDLTYKMAFLACHIQQTES 307

  Fly   264 LLSKESN--------LDI----SREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLL 316
            |:..:::        ||:    |.||....||::.:..|.:.:..||.|:|:|:..||..:|.:|
 Worm   308 LVGGDASGAVEETDYLDLWSKMSTEDRATLKKMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLML 372

  Fly   317 LGGV-EKILPNGTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTD 380
            |||| :|....||.|||||||.|:||||.||||:|:.|...:||||.|:|:.||..||||||..|
 Worm   373 LGGVAKKSRDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKD 437

  Fly   381 QETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLA 445
            :|:.|..:||||::|||.||.||||||||...|:.||||.|||..::|:|||:.|:||||.|:||
 Worm   438 EESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLNARASILA 502

  Fly   446 AANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADG 510
            |||||.||||:.:....|:.:...::|||||.||::|..:...|..|:..::..||         
 Worm   503 AANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECNEVTDYAIARRILDNHR--------- 558

  Fly   511 EPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPK 575
                            :.||..:...||:                   ::.::|||..|:|.|||
 Worm   559 ----------------AISEHTERDSVYK-------------------IDDIKKYIAFARCFKPK 588

  Fly   576 LGEQACEAIANEYSRLRSQEAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAI 640
            :.::|.|.:..||.:||..:: ......:..||.|.||:|:|||.|.||....|.|.::....|.
 Worm   589 ISDKAAETLVREYKKLRMSDS-NNAATSSWRITVRQLESLVRLSEALARLHCGKEVLVEHVEKAA 652

  Fly   641 ELVQFAYFK-----------------KVLDKDRPSKRRRNSGSDAEDDNGE 674
            ||:..:..:                 .|::.|:.::|    |.|:.|.:||
 Worm   653 ELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQR----GDDSMDHDGE 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 13..101 CDD:464206 17/115 (15%)
MCM 106..648 CDD:214631 201/599 (34%)
mcm-6NP_001023011.1 MCM_N 21..115 CDD:464206 17/115 (15%)
MCM 119..660 CDD:214631 201/600 (34%)
MCM6_C 710..807 CDD:465688
Blue background indicates that the domain is not in the aligned region.

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