DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm3 and Mcm5

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001289469.1 Gene:Mcm5 / 17218 MGIID:103197 Length:734 Species:Mus musculus


Alignment Length:839 Identity:255/839 - (30%)
Similarity:377/839 - (44%) Gaps:200/839 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AHEGEQFIKDIQREYVDFLDDEE---DQGIYAGHVKDMIAEKSKR--------LIVNVNDLK--- 52
            |.||:.....:||.:.:||....   |:..:....:|.:    ||        :.|.:.||.   
Mouse    21 AEEGQARKSQLQRRFKEFLRQYRVGTDRTGFTFKYRDEL----KRHYNLGEYWIEVEMEDLASFD 81

  Fly    53 -------RKNPQRALGLLSNAADEQLAFGRALKEYASTVD---PGYAKMHEDLFVGFEGCFGNRH 107
                   .|.|...|.||..||          ||.|..|.   |...::.:|:.|..:.     .
Mouse    82 EELADHLHKQPAEHLQLLEEAA----------KEVADEVTRPRPAGDELLQDIQVMLKS-----D 131

  Fly   108 VTP---RSLTSIYLGNMVCVEGIVTKVSLIRPKVVR---SVHYCPNTRKVMERKYTDLTSFEAVP 166
            .:|   |.|.|..:.::|.:.||:...|.:|.|..|   ....|.||          ||:....|
Mouse   132 ASPSSIRILKSDMMSHLVKIPGIIISASAVRAKATRISIQCRSCHNT----------LTNIAMRP 186

  Fly   167 --SGAAYPTK---DEDGNLLETEYGLSVY---------KDHQTLTIQEMPEKAPAGQLPRSVDIV 217
              .|.|.|.|   |:.|   ..:..|..|         .|.|||.:||:|:..|.|::||.:.:.
Mouse   187 GLEGYALPRKCNMDQAG---RPKCPLDPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLY 248

  Fly   218 CDDDLVDRCKPGDRVQIVGSY--------------RCLPGKRGGY---------TSGTFRTVLLA 259
            ||..|.|:..||:||.|:|.|              |...|.|..|         |.|:.|:  .|
Mouse   249 CDRYLCDKVVPGNRVTIMGIYSIKKFGLNPSKGRDRVGVGIRSSYIRVLGIQVDTDGSGRS--FA 311

  Fly   260 NNISLLSKESNLDISREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKIL 324
            .::|...:|.           .::||...:|:||:|||::|||.|...:|:||.|||.||..|.|
Mouse   312 GSVSPQEEEE-----------FRRLAALPNIYELISKSISPSIFGGMDMKKAIACLLFGGSRKRL 365

  Fly   325 PNGTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLE 389
            |:|...|||||:|::|||..||||||::|...:|..:.|:|:|||..||||:|..|..:....:|
Mouse   366 PDGLTRRGDINLLMLGDPGTAKSQLLKFVEKCSPIGVYTSGKGSSAAGLTASVIRDPSSRNFIME 430

  Fly   390 AGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANPVYGRY 454
            .|||||||.|||||||||||.:.||.||||.|||..::|:||||..:||:|||||||||.|:||:
Mouse   431 GGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRW 495

  Fly   455 DQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSY 519
            |:.|.. :||....::|||||::|::.|..:.:.|.|::.||:.:|                   
Mouse   496 DETKGE-DNIDFMPTILSRFDMIFIVKDEHNEERDMMLAKHVMTLH------------------- 540

  Fly   520 ADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAKCMKPKLGEQACEAI 584
            ..:|:...:.|.:.|....:|:                 :.:.|     |:| .|:|..:|.|.:
Mouse   541 VSALTQTQAVEGEIDLAKMKKF-----------------IAYCR-----ARC-GPRLSAEAAEKL 582

  Fly   585 ANEYSRLRS---QEAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFA 646
            .|.|..:||   |...::|...:.|||.|.||.::|::.|.::.::....|..|...|:.|.|.:
Mouse   583 KNRYIIMRSGARQHERDSDRRSSIPITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVS 647

  Fly   647 YFKKVLDKDRPSKRRRNSGSDAEDDNGEASSQRSPSRRSKR-TRTATVGADSDEEDIEPPQPDAG 710
                .||...........|...::|      |...||..|: .|...:|:...|..|      ..
Mouse   648 ----TLDAALSGNLSGVEGFTTQED------QEMLSRIEKQLKRRFAIGSQVSEHSI------VQ 696

  Fly   711 DLTRRETRRSLPARSVAMLMASPSSEEQSVATSTTEPAIISDARLGEFKNNLQR--LFR 767
            |.|:::.... ..|.|..||                      .|.||.::.:||  |:|
Mouse   697 DFTKQKYPEH-AIRKVLQLM----------------------LRRGEIQHRMQRKVLYR 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 23/106 (22%)
MCM 106..648 CDD:214631 202/587 (34%)
Mcm5NP_001289469.1 MCM_N 35..130 CDD:379644 23/108 (21%)
MCM 133..649 CDD:214631 202/588 (34%)
Arginine finger 512..515 2/2 (100%)
BREX_BrxC <618..>730 CDD:380283 30/150 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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