DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm3 and Mcm2

DIOPT Version :9

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_032590.2 Gene:Mcm2 / 17216 MGIID:105380 Length:904 Species:Mus musculus


Alignment Length:751 Identity:245/751 - (32%)
Similarity:370/751 - (49%) Gaps:103/751 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DIQREYVDFLD---DEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAADEQLA 72
            :|...:.:||.   |.....::...:.||..|..:.|:||..||..:....|..|....|:....
Mouse   194 EIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEAPAELLQI 258

  Fly    73 FGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTP-----RSLTSIYLGNMVCVEGIVTKVS 132
            |..|..|....:.|.|.::...:.|...      |: |     |||..::|..::...|:||..:
Mouse   259 FDEAALEVVLAMYPKYDRITNHIHVRIS------HL-PLVEELRSLRQLHLNQLIRTSGVVTSCT 316

  Fly   133 LIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVPSGAAYPTKDEDG----NLLETEYGLSVYKDH 193
            .:.|::....:.|.....|: ..:....:.|..|...  |.....|    |:.||     :|:::
Mouse   317 GVLPQLSMVKYNCSKCNFVL-GPFCQSQNQEVKPGSC--PECQSAGPFEINMEET-----IYQNY 373

  Fly   194 QTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYRCLPGKRGGYTSG------- 251
            |.:.|||.|.|..||:||||.|.:...||||.|||||.:::.|.|      ...|...       
Mouse   374 QRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIY------HNNYDGSLNTANGF 432

  Fly   252 -TFRTVLLANNISLLSKESNL---DISREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAI 312
             .|.|::|||:::  .|::.:   :::.||:.:...|:|:..|.|.:..|:||||:||..:|:.:
Mouse   433 PVFATIILANHVA--KKDNKVAVGELTDEDVKMITGLSKDQQIGEKIFASIAPSIYGHEDIKRGL 495

  Fly   313 LCLLLGGVEKILPNGT-RLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAA 376
            ...|.||..| .|.|. ::||||||||.|||..||||.|:|:...:.|||.|||:|:|.|||||.
Mouse   496 ALALFGGEPK-NPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAY 559

  Fly   377 VTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARC 441
            |.....:.|..|||||:|||||||..|||||||:|.|||:|||.|||..::||||||..||.|||
Mouse   560 VQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARC 624

  Fly   442 SVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPK 506
            :|:|||||:.||||...|..||:.|.:.::||||:|.|:.|.:|...|:|::..||..|...:|.
Mouse   625 TVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDVLCVVRDTVDPVQDEMLARFVVGSHVRHHPS 689

  Fly   507 EADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAK- 570
            ....|.|:.|.:...::......|.                         |..|.::|||..|| 
Mouse   690 NKKDEGLTNGGTLEPAMPNTYGVEP-------------------------LPQEVLKKYIIYAKE 729

  Fly   571 CMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQPITARTLETLIRLSTAHARARMSKSVTIDD 635
            .::|||.:...:.:|..||.||.:......:    |||.|.:|::||::.||||..:...|..||
Mouse   730 RVRPKLNQMDQDKVARMYSDLRKESMATGSI----PITVRHIESMIRMAEAHARMHLRDYVMEDD 790

  Fly   636 AHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDA------EDDNG-------EASSQRSPSRRSKR 687
            .:.||.::..::    :|..:.|..|....:.|      .|:|.       :..:::...:|:: 
Mouse   791 VNMAIRVMMESF----IDTQKFSVMRSMRKTFARYLSFRRDNNDLLLFILKQLVAEQVTYQRNR- 850

  Fly   688 TRTATVGADSDEEDIEPPQPDAGDLTRRETRRSLPA 723
                 .||..|  .||.|:.|..|..|:....:|.|
Mouse   851 -----FGAQQD--TIEIPEKDLMDKARQINIHNLSA 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 20/85 (24%)
MCM 106..648 CDD:214631 206/563 (37%)
Mcm2NP_032590.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..166
Interaction with KAT7. /evidence=ECO:0000269|PubMed:11278932 2..257 15/62 (24%)
MCM2_N 72..182 CDD:289392
MCM_N 198..310 CDD:291233 26/118 (22%)
MCM 291..803 CDD:214631 204/561 (36%)
P-loop_NTPase 485..>632 CDD:304359 86/147 (59%)
Arginine finger 655..658 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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