DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm3 and LOC1273388

DIOPT Version :10

Sequence 1:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_312356.3 Gene:LOC1273388 / 1273388 VectorBaseID:AGAMI1_009590 Length:834 Species:Anopheles gambiae


Alignment Length:743 Identity:218/743 - (29%)
Similarity:349/743 - (46%) Gaps:128/743 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKDIQREYVDFLDDEEDQGIYAG---HVKDMIAEKSKRLIVNVNDLKR---KNPQRALGLLSNAA 67
            ::.:|:.|.||.|..:...:.|.   .:|....:..::|....:.|::   .:|:..|..:..|.
Mosquito   115 VRAMQKHYSDFADLYDLPQVKATCWFELKLDACDNDQQLRTQWSTLRQDLMDSPEHTLACIGLAM 179

  Fly    68 DEQLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTPR--------SLTSI---YLGNM 121
            ...|     :.:..:......||:          |.  :.:.||        |::||   .:|.:
Mosquito   180 HHTL-----MSQQPTGSTQSDAKL----------CL--QTIRPRIVGYGPEVSISSIKVSSMGKL 227

  Fly   122 VCVEGIVTKVSLIRPKVVRSVH--------YCPNTRKVMERK--YTDLTSFEAVPSGAAYPTKDE 176
            |.|.|     ::||....:.::        .|.:.:.|.::.  ||..||..   ||.    |..
Mosquito   228 VSVRG-----TIIRAGATQIMNTWCAFRCAQCGSEQAVQQKDGIYTTPTSCH---SGC----KAR 280

  Fly   177 DGNLLETEYGLSVYKDHQTLTIQEMPE--KAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVG--S 237
            ...:|..:...:..:.:|||.:||..:  :..||...::::|....:|||...|||.|.:.|  .
Mosquito   281 SHFVLLQQSAFTRMEAYQTLRLQETTQGSRTVAGSAAKNIEIELTHELVDSVCPGDDVTVTGILK 345

  Fly   238 YRCLPGKRGGYTSGTFRTVLLA----NNISLLSKESNL----DISREDIMLCKKLAKNNDIFELL 294
            .|...|..|...:..|:..|.|    :|.::|:..:.|    ::..|.|.|.|   .....|.||
Mosquito   346 ARSQDGSDGAGKASMFKAYLQAVYVRSNKNVLANWNRLAEFTELDMEAIRLIK---AEPSPFRLL 407

  Fly   295 SKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPSVAKSQLLRYVLNTAPR 359
            .:||.|:|:||..||..:|..|.||    :.|..|.|.:|:||::|||.:.|||:|:...|.:||
Mosquito   408 VQSLCPTIYGHEIVKAGLLLGLFGG----MANTARTRAEIHVLVVGDPGIGKSQILQSCANVSPR 468

  Fly   360 AIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQG 424
            .|...|..||.||||..|.|::..| ..|||||:||||:||.|||||||||  ..:.:.|||||.
Mosquito   469 GIFVCGTNSSNVGLTVTVRTEKGVG-ASLEAGALVLADQGVCCIDEFDKMS--GHSGLLEVMEQR 530

  Fly   425 RVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVD 489
            .|:::|||:..::.||.:|||||||..|.|::.||..||:.|..:|||||||:|::||..:...|
Mosquito   531 SVSVAKAGVICTVPARTTVLAAANPAGGHYNKAKTVSENLKLHPALLSRFDLVFILLDRSNERTD 595

  Fly   490 QMISDHVVRMHRYRNPKEADGEPLSMGSSYAD---SLSFVSSS-----EEKKDTEVYEKYDALLH 546
            .:::.|:.::|..          ...|||:..   |..|..:|     ||:.:..:.|:. .|..
Mosquito   596 NLLTAHIQKVHGL----------AKAGSSHLQPQPSHPFFDASGHCSYEEEGEPPLEERL-RLAP 649

  Fly   547 GKSRQRHEKILSVEFMRKYIHIA-KCMKPKLGEQACEAIANEYSRLRSQEAVETDVARTQPITAR 610
            |:...    :|..|.::|||..| |.::|||..:|.|.:...:..||.... ..|:.   |:|.|
Mosquito   650 GEQMD----LLPPEIVQKYIGYARKNVQPKLTAKAAEELREFFVELRRAHN-HMDMI---PVTTR 706

  Fly   611 TLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDAED----- 670
            .||.||||:.|.|:..:|...|:......:.:::    :.:||.         ..:|..|     
Mosquito   707 QLEGLIRLTQARAKIDLSPEATVAHVRDVLAILR----QSMLDV---------FSTDEGDLQFTR 758

  Fly   671 -DNGEASSQRSPSRRSKR---TRTATVG 694
             .||..:|:.|..|:..|   :|:|..|
Mosquito   759 LTNGSGTSKTSMVRKFARVLASRSAVTG 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm3NP_511048.2 MCM_N 13..101 CDD:464206 15/93 (16%)
MCM 106..648 CDD:214631 189/583 (32%)
LOC1273388XP_312356.3 Mcm2 224..832 CDD:440854 197/617 (32%)

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