DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnp4F and rbm14a

DIOPT Version :10

Sequence 1:NP_511047.2 Gene:Rnp4F / 31448 FlyBaseID:FBgn0014024 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001108616.1 Gene:rbm14a / 323721 ZFINID:ZDB-GENE-050522-496 Length:471 Species:Danio rerio


Alignment Length:75 Identity:28/75 - (37%)
Similarity:43/75 - (57%) Gaps:0/75 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   725 KIFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKGIAYVEFEKPGEAQRAVAGRDGCLF 789
            |:||.||..:||.|:|::||||:|.:.|...|........|.|:|..|...:|::|:.|..|..|
Zfish    84 KVFVGNLCASCSVEDLYDLFSPYGKVLDCDKVKTKPSSLTGYAFVYMEHKEDAEQAIEGLHGTTF 148

  Fly   790 KGMNISVAIS 799
            .|..::|.:|
Zfish   149 MGRPLAVELS 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnp4FNP_511047.2 RRM_SF 722..802 CDD:473069 28/75 (37%)
2A1904 <860..>925 CDD:273344
Lsm_interact 922..940 CDD:398843
rbm14aNP_001108616.1 RRM_SF 7..75 CDD:473069
RRM_SF 84..156 CDD:473069 26/71 (37%)
Blue background indicates that the domain is not in the aligned region.

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