Protein Alignment Rnp4F and Hnrnpc

DIOPT Version :10

• Sequence 1: NP_511047.2
• Gene: Rnp4F / 31448
• FlyBaseID: FBgn0014024
• Length: 941
• Species: Drosophila melanogaster
• Sequence 2: NP_058580.1
• Gene: Hnrnpc / 15381
• MGIID: 107795
• Length: 313
• Species: Mus musculus
• Alignment Length: 306
• Identity: 71/306 - (23%)
• Similarity: 111/306 - (36%)
• Gaps: 113/306 - (36%)

  Fly   716 KYSPNMEINKIFVRNLHP-ACSKEELHELFSPFGTIKDVRLVHKLNKQFKGIAYVEFEKPGEAQR 779
            |..|....:::|:.||:. ...|.::..:||.:|.|.... ||      ||.|:|::.....|:.
Mouse     8 KTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCS-VH------KGFAFVQYVNERNARA 65

  Fly   780 AVAGRDGCLFKGMNISVAISNPPP--RGTSAVKPSVA------PKRRVPTSLI------------ 824
            ||||.||.:..|..:.:.::..|.  ||.:.||.|.|      |:...|:.|:
Mouse    66 AVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQR 130

  Fly   825 ---------------PTTLVRQEVAAKKLRL-----------LLPEPGDISSTSASVDV------ 857
                           |..:.|..|.:|:.|:           ...:.|...|:|.|..:
Mouse   131 DYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQ 195

  Fly   858 AIKREANGEEQKGD------------------------VQERDEQKGEEQ------------KGE 886
            |||:|....:||.|                        |:.::|:..|||            |.|
Mouse   196 AIKKELTQIKQKVDSLLESLEKIEKEQSKQADLSFSSPVEMKNEKSEEEQSSASVKKDETNVKME 260

  Fly   887 EQKGEEPKGE----------EQKGDDQIGEEQSGVEQKGDEKKEEE 922
            .:.|.:...|          |.:||||:       |.|.|||:.||
Mouse   261 SEAGADDSAEEGDLLDDDDNEDRGDDQL-------ELKDDEKEPEE 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnp4F	NP_511047.2	RRM_SF	722..802	CDD:473069	22/80 (28%)
		2A1904	<860..>925	CDD:273344	26/109 (24%)
		Lsm_interact	922..940	CDD:398843	1/1 (100%)
Hnrnpc	NP_058580.1	RRM_hnRNPC	10..93	CDD:410015	24/89 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	139..191		9/51 (18%)
		Nuclear localization signal. /evidence=ECO:0000255	155..161		1/5 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	219..313		21/88 (24%)