DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15930 and TDRD1

DIOPT Version :10

Sequence 1:NP_572214.2 Gene:CG15930 / 31446 FlyBaseID:FBgn0029754 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_942090.1 Gene:TDRD1 / 56165 HGNCID:11712 Length:1189 Species:Homo sapiens


Alignment Length:477 Identity:96/477 - (20%)
Similarity:169/477 - (35%) Gaps:118/477 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PLDLRCPSAKMRNNKVLADL--------------SDMLKVVEDIALEEKTTDSK-------KPAN 76
            |.|..|  .::::.:.||:|              ||....:.||...:.:.|.:       ..|:
Human   506 PEDFFC--QQLQSGRKLAELQASLSKYCDQLPPRSDFYPAIGDICCAQFSEDDQWYRASVLAYAS 568

  Fly    77 SEQQINGTIELALDLRQPNAKIRLVISDSSDLQKVFEKAHIALELKTTDSKPTAETDDQHHVRIF 141
            .|..:.|.::..      |.:|..::.....:.|:.|....|::......||:........:.:.
Human   569 EESVLVGYVDYG------NFEILSLMRLCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLM 627

  Fly   142 DKMLCNIVVPPDVADVQVNGKPLEQLLATVSERQAMNNPGPMKMHELHTGNADFMNSNSQVAEAA 206
            .|::.|.::...|.|      .||                                 ||.:.|..
Human   628 KKLVQNKIITVKVVD------KLE---------------------------------NSSLVELI 653

  Fly   207 ASVETLLASTSDNDSDSD---GLESKTTDGYIVKELIPSFSDFPDIGDVSLCALMYGLPMDAVG- 267
            ...||...|.|....|:.   |.:|..||.       ||     |:.:.|       :|:...| 
Human   654 DKSETPHVSVSKVLLDAGFAVGEQSMVTDK-------PS-----DVKETS-------VPLGVEGK 699

  Fly   268 ---MHWKLPPQRIQDICKEDSIFPIIMSCVFSPCEFWFHIVPPQYAKNPVAEMTIDLNWFYRHTT 329
               :.|......:      |....:::..::||.||:.|::     |....:...|||    .:.
Human   700 VNPLEWTWVELGV------DQTVDVVVCVIYSPGEFYCHVL-----KEDALKKLNDLN----KSL 749

  Fly   330 ISSYRAELPSYFYKE-GYICAAY--SECGWRRAMVLVTAPLDAQCVNIEYVDHALSVTLAPNHLR 391
            ....:.:||:.|..| |..|.|:  .:..|.||:|....|...  |.:.:||:.....:..:.||
Human   750 AEHCQQKLPNGFKAEIGQPCCAFFAGDGSWYRALVKEILPNGH--VKVHFVDYGNIEEVTADELR 812

  Fly   392 FLPLSFARTPPLVFRGKMSHVRPLANGWPKNGITAFQRMTFNRVLYAHVGELDTAQGIFSMRLSY 456
            .:..:|...|....|.:::.::.....|.:..||.||.......|.|.|.|: |..|| .:.|:.
Human   813 MISSTFLNLPFQGIRCQLADIQSRNKHWSEEAITRFQMCVAGIKLQARVVEV-TENGI-GVELTD 875

  Fly   457 DETFVPTI--NDLIESRIKLES 476
            ..|..|.|  :.||:..:.|:|
Human   876 LSTCYPRIISDVLIDEHLVLKS 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15930NP_572214.2 TUDOR 285..411 CDD:425754 29/128 (23%)
TDRD1NP_942090.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..66
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..138
zf-MYND 170..206 CDD:460312
Tudor_TDRD1_rpt1 268..396 CDD:410479
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..469
Tudor_TDRD1_rpt2 517..598 CDD:410480 14/86 (16%)
TUDOR 715..832 CDD:425754 29/127 (23%)
Tudor_TDRD1_rpt4 944..1059 CDD:410482
Blue background indicates that the domain is not in the aligned region.

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