DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15930 and qin

DIOPT Version :9

Sequence 1:NP_572214.2 Gene:CG15930 / 31446 FlyBaseID:FBgn0029754 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster


Alignment Length:489 Identity:108/489 - (22%)
Similarity:171/489 - (34%) Gaps:145/489 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KMDVKEGRLQTLLSKLRKISEEAEDNNDVPLDLRCPSAKMRNNKVLADLSDMLKVVEDIALEEKT 68
            :||.....|...||.:|.:.:|....|.:|   :| ..|:.|    .|::.|:            
  Fly  1415 EMDTVHLNLVMKLSGVRIVDDETVGPNKIP---KC-QIKVGN----VDIATMM------------ 1459

  Fly    69 TDSKKPANSEQQI--NGTIELALDLRQPNAKIRLVISDSSDLQKVFEKA-HIAL---ELKTTDSK 127
            .||......|:|.  |.|..|      |:.|.   :.|.    |||::. |:|.   ||...::.
  Fly  1460 IDSGMSVPIEKQTIKNNTKYL------PSQKF---LEDF----KVFDELDHLAAGEGELSDKEAP 1511

  Fly   128 PTAETDDQHHVRIFDKMLCNIVVPPDVADVQVNGKPLEQLLATVSERQAMN-------NPGPMKM 185
            ||....|                  .::.||  ..|.::.|....|.:|..       .....||
  Fly  1512 PTQRKHD------------------SISSVQ--QPPTKKFLVDQEEVEAFECDQDFDCQQAAQKM 1556

  Fly   186 H---------------ELHTGNADFMNSNSQVA---EAAASVETLLASTSDNDSDSDGLESKTTD 232
            |               |....:.|..:|||..:   |..|:|         |||..:.|.|..|:
  Fly  1557 HLNNNFYLGDFGKYADETTARDEDEPHSNSSKSIDMEVFANV---------NDSQLEPLNSFATE 1612

  Fly   233 GYI---------VKELIPSFSDFPDIGDVSLCALMYGLPMDAVGMHWKLP-PQRIQDI-CKEDSI 286
            ..|         :|:.| :||..    |.|.....|    ||......|. |..:::. |..|: 
  Fly  1613 QLIRRIALRQQEIKDSI-TFSPI----DTSSVRSFY----DASASFKTLSLPNGVKEFYCTVDN- 1667

  Fly   287 FPIIMSCVFSPCEFWFHIVP--PQYAKNPVAEMTIDLNWFYRHTTISSYRAELPSYFYKEGYIC- 348
                   |.|..|  ..|.|  .::.|:.::        ..:.|:.....|| |....|.|.:| 
  Fly  1668 -------VLSDTE--LQIAPCLSEFTKHEIS--------LIQETSTLIKDAE-PLMEPKVGDLCL 1714

  Fly   349 AAYS-ECGWRRAMVLVTAPL---DAQCVNIEYVDHALSVTLAPNHLRFLPLSFARTPPLVFRGKM 409
            |.|| :..|.||.:...:|:   .::.|.:.|:|...:..::.|||:.:|......|...|..|:
  Fly  1715 ARYSRDKQWYRANIKEISPILSPTSEQVTVFYIDFHDTEKVSFNHLKVMPSQLFMFPLRSFCVKL 1779

  Fly   410 SHVRPLANGWPKNGITAFQR------MTFNRVLY 437
            ..::...:...|:...|.|.      :.|.||.|
  Fly  1780 HGIKRNKSFKEKSVRQALQACLCQHPLVFARVHY 1813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15930NP_572214.2 TUDOR 281..411 CDD:278965 32/136 (24%)
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662
TUDOR 536..648 CDD:278965
TUDOR 741..859 CDD:278965
TUDOR <805..839 CDD:119391
TUDOR 981..1107 CDD:278965
TUDOR 1296..1403 CDD:278965
TUDOR 1337..1385 CDD:119391
TUDOR 1710..1761 CDD:119391 14/50 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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