DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15930 and SND1

DIOPT Version :10

Sequence 1:NP_572214.2 Gene:CG15930 / 31446 FlyBaseID:FBgn0029754 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_055205.2 Gene:SND1 / 27044 HGNCID:30646 Length:910 Species:Homo sapiens


Alignment Length:102 Identity:24/102 - (23%)
Similarity:42/102 - (41%) Gaps:20/102 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 VAEMTIDLNWFYR---------------HTTISSYRAELPSYFYKEGYIC-AAYSECGWRRAMV- 361
            |.|:|.||:::.:               ...|:|:.....||..:.|..| |.:.:..|.||.| 
Human   687 VTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKFVDGEWYRARVE 751

  Fly   362 LVTAPLDAQCVNIEYVDHALSVTLAPNHLRFLPLSFA 398
            .|.:|..   :::.|:|:.....|....|..|..:|:
Human   752 KVESPAK---IHVFYIDYGNREVLPSTRLGTLSPAFS 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15930NP_572214.2 TUDOR 285..411 CDD:425754 24/102 (24%)
SND1NP_055205.2 SNc 21..166 CDD:214615
SNc 193..328 CDD:214615
Nuclear localization signal. /evidence=ECO:0000255 321..325
SNc 350..496 CDD:238102
Nuclear localization signal. /evidence=ECO:0000255 388..392
SNc 525..660 CDD:214615
Tudor_TDRD11 703..785 CDD:410504 18/84 (21%)
SNc <844..895 CDD:469627
Blue background indicates that the domain is not in the aligned region.

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