DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dhd and Txl

DIOPT Version :9

Sequence 1:NP_001284882.1 Gene:dhd / 31444 FlyBaseID:FBgn0011761 Length:107 Species:Drosophila melanogaster
Sequence 2:NP_523938.2 Gene:Txl / 38646 FlyBaseID:FBgn0035631 Length:287 Species:Drosophila melanogaster


Alignment Length:98 Identity:38/98 - (38%)
Similarity:57/98 - (58%) Gaps:4/98 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVRTMND---YHKRIEAADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEE 64
            |||.:||   :...:..|..:|:|:||.|:||||||.:....::...|| .||:.||:||||.::
  Fly     2 SVRVINDESHFQAELAQAGIQLVVVDFTASWCGPCKRIAPIFETFPTKY-PKAIFLKVDVDKCQD 65

  Fly    65 LTERYKVRSMPTFVFLRQNRRLASFAGADEHKL 97
            ......|.:||||:|.|...::....|||.:.|
  Fly    66 TAAGQGVSAMPTFIFYRNRTKIDRVQGADVNGL 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dhdNP_001284882.1 TRX_family 17..93 CDD:239245 30/75 (40%)
TxlNP_523938.2 TRX_family 10..103 CDD:239245 33/90 (37%)
PITH 125..266 CDD:283785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464327
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D146939at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.750

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