DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dhd and tmx1

DIOPT Version :9

Sequence 1:NP_001284882.1 Gene:dhd / 31444 FlyBaseID:FBgn0011761 Length:107 Species:Drosophila melanogaster
Sequence 2:NP_001108605.1 Gene:tmx1 / 323607 ZFINID:ZDB-GENE-030131-2327 Length:284 Species:Danio rerio


Alignment Length:110 Identity:27/110 - (24%)
Similarity:45/110 - (40%) Gaps:26/110 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLDFYATWCGPCKEMESTVKSLARKYSSKAV-VLKIDVDKFEELTERYKVRSMPTF------VFL 80
            :::|:|.||..|:::|......|.......| :.|:||.:...|:.|:.:.::||.      ||.
Zfish    55 MIEFFAPWCPACQQLEPVWTEFAGWGDDLGVNIAKVDVTEHPGLSGRFIIMALPTIYHCKDGVFR 119

  Fly    81 RQ--NRRLASFAGADEHK-----------------LTNMMAKLVK 106
            |.  :|....|....|.|                 |.|:|:.|.|
Zfish   120 RYQGDRSKEDFLSFIEEKKWQSIEPVSSWFGPSSFLMNIMSALFK 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dhdNP_001284882.1 TRX_family 17..93 CDD:239245 20/78 (26%)
tmx1NP_001108605.1 PDI_a_TMX 36..136 CDD:239292 20/80 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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