DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dhd and png-1

DIOPT Version :9

Sequence 1:NP_001284882.1 Gene:dhd / 31444 FlyBaseID:FBgn0011761 Length:107 Species:Drosophila melanogaster
Sequence 2:NP_492913.1 Gene:png-1 / 173028 WormBaseID:WBGene00010160 Length:606 Species:Caenorhabditis elegans


Alignment Length:97 Identity:29/97 - (29%)
Similarity:61/97 - (62%) Gaps:3/97 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASVRTMNDYHKRIEAADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEEL 65
            :.|:..:|:..:|.:|  ::||::||:|.|||||:.:....:..:.:|.: |..||::.|...::
 Worm     6 VGSLPELNNILERSDA--NRLIIIDFFANWCGPCRMISPIFEQFSAEYGN-ATFLKVNCDVARDI 67

  Fly    66 TERYKVRSMPTFVFLRQNRRLASFAGADEHKL 97
            .:||.:.:||||:||:..:::....||::..:
 Worm    68 VQRYNISAMPTFIFLKNRQQVDMVRGANQQAI 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dhdNP_001284882.1 TRX_family 17..93 CDD:239245 24/75 (32%)
png-1NP_492913.1 TRX_family 20..103 CDD:239245 26/83 (31%)
Transglut_core 204..296 CDD:280085
YebA <235..312 CDD:224224
PAW 407..604 CDD:299187
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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