DRSC/TRiP Functional Genomics Resources

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Protein Alignment dhd and Txnl1

DIOPT Version :9

Sequence 1:NP_001284882.1 Gene:dhd / 31444 FlyBaseID:FBgn0011761 Length:107 Species:Drosophila melanogaster
Sequence 2:XP_006254889.1 Gene:Txnl1 / 140922 RGDID:621717 Length:292 Species:Rattus norvegicus


Alignment Length:93 Identity:28/93 - (30%)
Similarity:46/93 - (49%) Gaps:5/93 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DYHKRIEAADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKVRS 73
            |:...:..|..:|.|:.|....||||..:.....|::.|| .:||.|::||.:.:.......:.:
  Rat    12 DFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQGTAATNNISA 75

  Fly    74 MPTFVFLRQNRRLASFAGAD----EHKL 97
            .|||:|.|...|:..:.|||    |.|:
  Rat    76 TPTFLFFRNKVRIDQYQGADAVGLEEKI 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dhdNP_001284882.1 TRX_family 17..93 CDD:239245 23/75 (31%)
Txnl1XP_006254889.1 TRX_family 12..104 CDD:239245 28/93 (30%)
PITH 126..268 CDD:283785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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