DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrxT and LOC100497910

DIOPT Version :9

Sequence 1:NP_001284881.1 Gene:TrxT / 31443 FlyBaseID:FBgn0029752 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_031746215.1 Gene:LOC100497910 / 100497910 -ID:- Length:112 Species:Xenopus tropicalis


Alignment Length:100 Identity:33/100 - (33%)
Similarity:52/100 - (52%) Gaps:1/100 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VRNKDDLDQQLILAEDKLVVIDFYADWCGPCKIIAPKLDELAQQYSDRVVVLKVNVDENEDITVE 69
            |.:.|:|...|..|.:|||::...:..||.||:..|.|:.|..:..| ||.||.:|.|:::....
 Frog     4 VNDCDELHFALQEAGEKLVLVALSSRRCGHCKLTTPYLESLIPKMPD-VVFLKADVSESQEFMEL 67

  Fly    70 YNVNSMPTFVFIKGGNVLELFVGCNSDKLAKLMEK 104
            :.|..:|.|.|....|.|..|.|.|::.|...:|:
 Frog    68 FQVKGVPAFHFFYKCNRLYYFQGANTEFLGNKIEE 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrxTNP_001284881.1 Thioredoxin 13..105 CDD:278513 30/91 (33%)
LOC100497910XP_031746215.1 TRX_family 8..103 CDD:239245 32/95 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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