Protein Alignment snf and AT1G06960

DIOPT Version :10

• Sequence 1: NP_511045.1
• Gene: snf / 31442
• FlyBaseID: FBgn0003449
• Length: 216
• Species: Drosophila melanogaster
• Sequence 2: NP_850936.1
• Gene: AT1G06960 / 837206
• AraportID: AT1G06960
• Length: 229
• Species: Arabidopsis thaliana
• Alignment Length: 229
• Identity: 121/229 - (52%)
• Similarity: 162/229 - (70%)
• Gaps: 24/229 - (10%)

  Fly     5 PNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTM 69
            |||:|||.::||||||||||:|||.:|||||::||:|||||.|:||||:|:|.|:.:||||:|.|
plant     8 PNQSIYIKHINEKIKKEELKRSLYCLFSQFGRLLDVVALKTPKLRGQAWVVFTEVTAASNAVRQM 72

  Fly    70 QGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDKKK---------KPS 125
            |.||||||||:|.|:||.||.|.|.:|:|..:.||:|       .:||.::|:         .|:
plant    73 QNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPKEKKMK-------QEEKVERKRHAEETQQPSMPN 130

  Fly   126 SAENSN--------PNAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAF 182
            .|...|        |:.|...|||.|||:.|||.|||.|||.:||.|:|||||:|::..:..|||
plant   131 GATTQNGMPVPPFQPSGQDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAF 195

  Fly   183 VEFTTELQSNAAKEALQGFKITPTHAMKITFAKK 216
            ||:..::||:.|.:|||||||||.:.|.::||||
plant   196 VEYEDDVQSSMAMQALQGFKITPQNPMVVSFAKK 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snf	NP_511045.1	RRM1_SNF	1..85	CDD:409905	56/79 (71%)
		RRM2_SNF	137..216	CDD:240923	44/78 (56%)
AT1G06960	NP_850936.1	RRM1_U1A_like	12..88	CDD:409692	53/75 (71%)
		RRM2_U1A_like	153..225	CDD:409693	41/71 (58%)